RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 ANKRD40Q6AI12 368 aa20.34■□□□□ 0.85
LINC00535-201ENST00000501400 SULF1Q8IWU6 871 aa20.34■□□□□ 0.85
LINC00535-201ENST00000501400 DCPSQ96C86 337 aaKnown RBP20.34■□□□□ 0.85
LINC00535-201ENST00000501400 TRERF1Q96PN7 1200 aa20.34■□□□□ 0.85
LINC00535-201ENST00000501400 SEMA6BQ9H3T3 888 aa20.34■□□□□ 0.85
LINC00535-201ENST00000501400 THAP9Q9H5L6 903 aa20.34■□□□□ 0.85
LINC00535-201ENST00000501400 MAP3K20Q9NYL2 800 aaKnown RBP20.34■□□□□ 0.85
LINC00535-201ENST00000501400 STK24Q9Y6E0 443 aa20.34■□□□□ 0.85
LINC00535-201ENST00000501400 NPHP3-ACAD11A0A0J9YXS1 232 aa20.33■□□□□ 0.85
LINC00535-201ENST00000501400 COPB1P53618 953 aaKnown RBP20.33■□□□□ 0.85
LINC00535-201ENST00000501400 SH3D19Q5HYK7 790 aa20.33■□□□□ 0.85
LINC00535-201ENST00000501400 CATSPERGQ6ZRH7 1159 aa20.33■□□□□ 0.85
LINC00535-201ENST00000501400 L3MBTL3Q96JM7 780 aaPredicted RBP20.33■□□□□ 0.85
LINC00535-201ENST00000501400 TAB2Q9NYJ8 693 aa20.33■□□□□ 0.85
LINC00535-201ENST00000501400 RGL1Q9NZL6 768 aa20.33■□□□□ 0.85
LINC00535-201ENST00000501400 PNMA2Q9UL42 364 aa20.33■□□□□ 0.85
LINC00535-201ENST00000501400 LCTP09848 1927 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 FRMD3A2A2Y4 597 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 GAS7O60861 476 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 MRPS9P82933 396 aaKnown RBP20.33■□□□□ 0.84
LINC00535-201ENST00000501400 CENPPQ6IPU0 288 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 GUF1Q8N442 669 aaKnown RBP20.33■□□□□ 0.84
LINC00535-201ENST00000501400 SAMD3Q8N6K7 520 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 HSD17B14Q9BPX1 270 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 ZNF577Q9BSK1 485 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 SRRTQ9BXP5 876 aaKnown RBP20.33■□□□□ 0.84
LINC00535-201ENST00000501400 FGFBP2Q9BYJ0 223 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 UNC45AQ9H3U1 944 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 RNF146Q9NTX7 359 aa20.33■□□□□ 0.84
LINC00535-201ENST00000501400 CTDP1Q9Y5B0 961 aaPredicted RBP20.33■□□□□ 0.84
LINC00535-201ENST00000501400 BICDL2A1A5D9 508 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 CHMP2AO43633 222 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 BCRP11274 1271 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 MAP3K9P80192 1104 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 CACNB1Q02641 598 aaPredicted RBP20.32■□□□□ 0.84
LINC00535-201ENST00000501400 PABPC4Q13310 644 aaKnown RBP eCLIP20.32■□□□□ 0.84
LINC00535-201ENST00000501400 TMEM132BQ14DG7 1078 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 PCNX4Q63HM2 1172 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 SYT2Q8N9I0 419 aaPredicted RBP20.32■□□□□ 0.84
LINC00535-201ENST00000501400 TMX1Q9H3N1 280 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 PANK4Q9NVE7 773 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 TMOD4Q9NZQ9 345 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 PCDHA2Q9Y5H9 948 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 UBIAD1Q9Y5Z9 338 aa20.32■□□□□ 0.84
LINC00535-201ENST00000501400 IPO5O00410 1097 aaKnown RBP20.31■□□□□ 0.84
LINC00535-201ENST00000501400 OAZ1P54368 228 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 PSMD2Q13200 908 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 COG2Q14746 738 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 SNRNP48Q6IEG0 339 aaKnown RBP20.31■□□□□ 0.84
LINC00535-201ENST00000501400 NIPA1Q7RTP0 329 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 KRT26Q7Z3Y9 468 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 TMEM139Q8IV31 216 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 CSGALNACT2Q8N6G5 542 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 TC2NQ8N9U0 490 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 PURBQ96QR8 312 aaKnown RBP20.31■□□□□ 0.84
LINC00535-201ENST00000501400 VPS16Q9H269 839 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 DNM3Q9UQ16 869 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 SPDYE16A6NNV3 312 aaPredicted RBP20.31■□□□□ 0.84
LINC00535-201ENST00000501400 USP27XA6NNY8 438 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 EEF1GP26641 437 aaKnown RBP20.31■□□□□ 0.84
LINC00535-201ENST00000501400 PGM5Q15124 567 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 FILIP1LQ4L180 1135 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 FAM26FQ5R3K3 315 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 RNF207Q6ZRF8 634 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 NOC3LQ8WTT2 800 aaKnown RBP20.31■□□□□ 0.84
LINC00535-201ENST00000501400 WDR11Q9BZH6 1224 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 TUFT1Q9NNX1 390 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 KCNH7Q9NS40 1196 aa20.31■□□□□ 0.84
LINC00535-201ENST00000501400 ATP2A1O14983 1001 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 SLITRK3O94933 977 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 EIF2AK2P19525 551 aaKnown RBP20.3■□□□□ 0.84
LINC00535-201ENST00000501400 HOXA7P31268 230 aaPredicted RBP20.3■□□□□ 0.84
LINC00535-201ENST00000501400 CTTNQ14247 550 aaKnown RBP20.3■□□□□ 0.84
LINC00535-201ENST00000501400 LRRC41Q15345 812 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 TKFCQ3LXA3 575 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 CEP135Q66GS9 1140 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 NSMFQ6X4W1 530 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 EEF2KMTQ96G04 330 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 DYDC2Q96IM9 177 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 TEKT3Q9BXF9 490 aa20.3■□□□□ 0.84
LINC00535-201ENST00000501400 BMP2KQ9NSY1 1161 aaPredicted RBP20.3■□□□□ 0.84
LINC00535-201ENST00000501400 WRAP73Q9P2S5 460 aaPredicted RBP20.3■□□□□ 0.84
LINC00535-201ENST00000501400 N4BP3O15049 544 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 RAD51AP2Q09MP3 1159 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 CCDC65Q8IXS2 484 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 RBM46Q8TBY0 533 aaKnown RBP20.29■□□□□ 0.84
LINC00535-201ENST00000501400 RIT2Q99578 217 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 PDCD2LQ9BRP1 358 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 PXMP2Q9NR77 195 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 ITIH6Q6UXX5 1313 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 MYPNQ86TC9 1320 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 LOXHD1Q8IVV2 1947 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 DHX15O43143 795 aaKnown RBP20.29■□□□□ 0.84
LINC00535-201ENST00000501400 EYA4O95677 639 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 KCNJ6P48051 423 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 ITGB3BPQ13352 177 aaPredicted RBP20.29■□□□□ 0.84
LINC00535-201ENST00000501400 GIT2Q14161 759 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 ZCWPW2Q504Y3 356 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms