RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 CHST7Q9NS84 486 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 MYH14Q7Z406 1995 aaKnown RBP8.57□□□□□ -1.04
VIM-207ENST00000495528 KDM2BQ8NHM5 1336 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 KCPQ6ZWJ8 1503 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 GJB6O95452 261 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 ESR1P03372 595 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 ZNF445P59923 1031 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 FSTL1Q12841 308 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 RAB33AQ14088 237 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 NFIXQ14938 502 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 NCAPHQ15003 741 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 PLCL1Q15111 1095 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 SLC52A2Q9HAB3 445 aa8.56□□□□□ -1.04
VIM-207ENST00000495528 U2SURPO15042 1029 aaKnown RBP8.55□□□□□ -1.04
VIM-207ENST00000495528 CYP19A1P11511 503 aaPredicted RBP8.55□□□□□ -1.04
VIM-207ENST00000495528 ITGA4P13612 1032 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 PRELPP51888 382 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 GP2P55259 537 aaKnown RBP8.55□□□□□ -1.04
VIM-207ENST00000495528 PPP2R5DQ14738 602 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 GAB4Q2WGN9 574 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 TMPRSS7Q7RTY8 843 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 NBPF11Q86T75 865 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 JMYQ8N9B5 988 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 SYTL5Q8TDW5 730 aaPredicted RBP8.55□□□□□ -1.04
VIM-207ENST00000495528 PPP1R14AQ96A00 147 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 TCTN2Q96GX1 697 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 KLHL25Q9H0H3 589 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 NOL6Q9H6R4 1146 aaKnown RBP8.55□□□□□ -1.04
VIM-207ENST00000495528 ZBTB1Q9Y2K1 713 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 SUGT1Q9Y2Z0 365 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 PCDHA11Q9Y5I1 949 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 ZNF831Q5JPB2 1677 aa8.55□□□□□ -1.04
VIM-207ENST00000495528 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
VIM-207ENST00000495528 COL5A3P25940 1745 aaPredicted RBP8.54□□□□□ -1.04
VIM-207ENST00000495528 SSU72P8A0A1W2PR75 194 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 CCDC85CA6NKD9 419 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 RNMTO43148 476 aaKnown RBP8.54□□□□□ -1.04
VIM-207ENST00000495528 SERPINB2P05120 415 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 EGR3Q06889 387 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 DDR2Q16832 855 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 MRM1Q6IN84 353 aaKnown RBP8.54□□□□□ -1.04
VIM-207ENST00000495528 DAGLBQ8NCG7 672 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 ENOX1Q8TC92 643 aaKnown RBP8.54□□□□□ -1.04
VIM-207ENST00000495528 PI4K2BQ8TCG2 481 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 FOXP3Q9BZS1 431 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 GBP3Q9H0R5 595 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 NARFQ9UHQ1 456 aa8.54□□□□□ -1.04
VIM-207ENST00000495528 ANKRD34BA5PLL1 514 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 HMOX1P09601 288 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 CRTC3Q6UUV7 619 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 FIBCD1Q8N539 461 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 ZNF655Q8N720 491 aaPredicted RBP8.53□□□□□ -1.04
VIM-207ENST00000495528 AGBL5Q8NDL9 886 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 SMC1BQ8NDV3 1235 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 ARMC5Q96C12 935 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 SUSD2Q9UGT4 822 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 KNSTRNQ9Y448 316 aa8.53□□□□□ -1.04
VIM-207ENST00000495528 BRCA1P38398 1863 aaKnown RBP8.53□□□□□ -1.04
VIM-207ENST00000495528 GLTPD2A6NH11 291 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 H0Y8X5 98 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 FKTNO75072 461 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 PPM1BO75688 479 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 SYPP08247 313 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 FUT4P22083 530 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 CANXP27824 592 aaKnown RBP8.52□□□□□ -1.05
VIM-207ENST00000495528 CTSKP43235 329 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 RBL2Q08999 1139 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 MTHFSDQ2M296 383 aaKnown RBP8.52□□□□□ -1.05
VIM-207ENST00000495528 C2CD5Q86YS7 1000 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 ABI1Q8IZP0 508 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 TTLL6Q8N841 843 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 ZDHHC15Q96MV8 337 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 APBA2Q99767 749 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 LGR4Q9BXB1 951 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 SLAMF8Q9P0V8 285 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 WHRNQ9P202 907 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 APEX2Q9UBZ4 518 aa8.52□□□□□ -1.05
VIM-207ENST00000495528 OAS3Q9Y6K5 1087 aaKnown RBP8.52□□□□□ -1.05
VIM-207ENST00000495528 COL15A1P39059 1388 aa8.51□□□□□ -1.05
VIM-207ENST00000495528 H0YIN7 160 aa8.51□□□□□ -1.05
VIM-207ENST00000495528 VEGFAP15692 232 aaPredicted RBP8.51□□□□□ -1.05
VIM-207ENST00000495528 PCBP3P57721 371 aaKnown RBP8.51□□□□□ -1.05
VIM-207ENST00000495528 SV2CQ496J9 727 aa8.51□□□□□ -1.05
VIM-207ENST00000495528 LMCD1Q9NZU5 365 aa8.51□□□□□ -1.05
VIM-207ENST00000495528 ADAMTS6Q9UKP5 1117 aa8.51□□□□□ -1.05
VIM-207ENST00000495528 TCFL5Q9UL49 500 aa8.51□□□□□ -1.05
VIM-207ENST00000495528 FHOD1Q9Y613 1164 aa8.51□□□□□ -1.05
VIM-207ENST00000495528 TJP1Q07157 1748 aa8.51□□□□□ -1.05
VIM-207ENST00000495528 ADAMTS7Q9UKP4 1686 aa8.5□□□□□ -1.05
VIM-207ENST00000495528 ARFGEF1Q9Y6D6 1849 aa8.5□□□□□ -1.05
VIM-207ENST00000495528 SUSD5O60279 629 aa8.5□□□□□ -1.05
VIM-207ENST00000495528 EIF5P55010 431 aaKnown RBP8.5□□□□□ -1.05
VIM-207ENST00000495528 TBC1D9BQ66K14 1250 aa8.5□□□□□ -1.05
VIM-207ENST00000495528 CWF19L1Q69YN2 538 aaKnown RBP8.5□□□□□ -1.05
VIM-207ENST00000495528 UBXN4Q92575 508 aa8.5□□□□□ -1.05
VIM-207ENST00000495528 WDR90Q96KV7 1748 aa8.5□□□□□ -1.05
VIM-207ENST00000495528 PRR13Q9NZ81 148 aa8.5□□□□□ -1.05
VIM-207ENST00000495528 CARMIL3Q8ND23 1372 aa8.49□□□□□ -1.05
VIM-207ENST00000495528 DNAJC25-GNG10A0A024R161 153 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms