RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 KIF11P52732 1056 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 SPP2Q13103 211 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 WHAMMP3Q1A5X7 153 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 CCDC50Q8IVM0 306 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 RSPH14Q9UHP6 348 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 ABCB11O95342 1321 aa14.53□□□□□ -0.08
HMGN1-216ENST00000486741 ASNSP08243 561 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 HHIPL2Q6UWX4 724 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 DYDC2Q96IM9 177 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 IMPG2Q9BZV3 1241 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 GOLGA8IPA6NC78 632 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 LRRC53A6NM62 1247 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 GOLGA8JA6NMD2 632 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 TNNI1P19237 187 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 NF2P35240 595 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 ECE1P42892 770 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 GUCY2FP51841 1108 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 DALRD3Q5D0E6 543 aaKnown RBP14.52□□□□□ -0.08
HMGN1-216ENST00000486741 SUGCTQ9HAC7 445 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 FBXO28Q9NVF7 368 aa14.52□□□□□ -0.08
HMGN1-216ENST00000486741 GFPT2O94808 682 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 KIAA0754O94854 1291 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 TNNC1P63316 161 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 DAAM2Q86T65 1068 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 SYNCQ9H7C4 482 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 LMO7Q8WWI1 1683 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 GYPCP04921 128 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 ACER1Q8TDN7 264 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 ZNF384Q8TF68 577 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 DYDC1Q8WWB3 177 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 GLG1Q92896 1179 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 TAOK3Q9H2K8 898 aa14.52□□□□□ -0.09
HMGN1-216ENST00000486741 NOP56O00567 594 aaKnown RBP14.51□□□□□ -0.09
HMGN1-216ENST00000486741 LRRC63Q05C16 580 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 CFAP221Q4G0U5 840 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 CFAP58Q5T655 872 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 RABGGTAQ92696 567 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 PIM2Q9P1W9 311 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 SUGT1Q9Y2Z0 365 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 AFDNP55196 1824 aaKnown RBP14.51□□□□□ -0.09
HMGN1-216ENST00000486741 PRPHP41219 470 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 NT5C2P49902 561 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 IRX3P78415 501 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-216ENST00000486741 MCTP2Q6DN12 878 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 CCDC155Q8N6L0 562 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 MLXIPQ9HAP2 919 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 PARVGQ9HBI0 331 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 PSMD14O00487 310 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 AFPP02771 609 aaKnown RBP14.51□□□□□ -0.09
HMGN1-216ENST00000486741 IL1R1P14778 569 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 RDXP35241 583 aaKnown RBP14.51□□□□□ -0.09
HMGN1-216ENST00000486741 C2orf54Q08AI8 447 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 TUBB2AQ13885 445 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 GADL1Q6ZQY3 521 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 MCF2L2Q86YR7 1114 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 RETREG2Q8NC44 543 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 NACC1Q96RE7 527 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 TUBB2BQ9BVA1 445 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 GCNT4Q9P109 453 aa14.51□□□□□ -0.09
HMGN1-216ENST00000486741 SHTN1A0MZ66 631 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 PLCB3Q01970 1234 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 AP3B2Q13367 1082 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 EAPPQ56P03 285 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-216ENST00000486741 DCAF15Q66K64 600 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 NCAPG2Q86XI2 1143 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 STK24Q9Y6E0 443 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 PVALEFA0A1B0GWK0 134 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 GFPT1Q06210 699 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-216ENST00000486741 STRN3Q13033 797 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 LONRF2Q1L5Z9 754 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 NUCKS1Q9H1E3 243 aaKnown RBP14.5□□□□□ -0.09
HMGN1-216ENST00000486741 PDE11AQ9HCR9 933 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 DDX41Q9UJV9 622 aaKnown RBP14.5□□□□□ -0.09
HMGN1-216ENST00000486741 PCDHA13Q9Y5I0 950 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 RHOBTB3O94955 611 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 H2AFZP0C0S5 128 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 H2AFVQ71UI9 128 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 UBLCP1Q8WVY7 318 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-216ENST00000486741 METTL14Q9HCE5 456 aaKnown RBP14.5□□□□□ -0.09
HMGN1-216ENST00000486741 HYOU1Q9Y4L1 999 aa14.5□□□□□ -0.09
HMGN1-216ENST00000486741 HPDP32754 393 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 SLC7A5Q01650 507 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 SF3A3Q12874 501 aaKnown RBP eCLIP14.49□□□□□ -0.096e-7■□□□□ 11.3
HMGN1-216ENST00000486741 PSMD2Q13200 908 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 RASA3Q14644 834 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 KCNB1Q14721 858 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 WDR44Q5JSH3 913 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 SEPT14Q6ZU15 432 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 CERS5Q8N5B7 392 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 WDR11Q9BZH6 1224 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 LIMA1Q9UHB6 759 aaKnown RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 LRRIQ4A6NIV6 560 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 BCRP11274 1271 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 TM4SF1P30408 202 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 KCNH2Q12809 1159 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 IPO4Q8TEX9 1081 aaKnown RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 ZHX2Q9Y6X8 837 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 PMS1P54277 932 aaKnown RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 GYS2P54840 703 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms