RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PPP1R15BQ5SWA1 713 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 MTHFD1LQ6UB35 978 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 CCHCR1Q8TD31 782 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 PSMB7Q99436 277 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 MAGEC2Q9UBF1 373 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 MAPK8IP1Q9UQF2 711 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 COL1A1P02452 1464 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 ZSCAN5CA6NGD5 496 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 MAGEA8P43361 318 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 VAV2P52735 878 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 FIGNQ5HY92 759 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 MAATS1Q7Z4T9 603 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 SPICE1Q8N0Z3 855 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 GALNT15Q8N3T1 639 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 IQCDQ96DY2 449 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 SH3GLB2Q9NR46 395 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 EXOC1Q9NV70 894 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 ZNHIT6Q9NWK9 470 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 PCDHGA4Q9Y5G9 962 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 A0A1W2PQJ5 194 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 IMPDH2P12268 514 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 SUSD4Q5VX71 490 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 BRINP3Q76B58 766 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 IFT81Q8WYA0 676 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 DHTKD1Q96HY7 919 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 GORASP1Q9BQQ3 440 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 NHEJ1Q9H9Q4 299 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 KBTBD4Q9NVX7 518 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
SEC61A1-205ENST00000483956 SPDYE5A6NIY4 337 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 ZSCAN9O15535 394 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 CHRNDQ07001 517 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 CD302Q8IX05 232 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 MAGEF1Q9HAY2 307 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 MYH1P12882 1939 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 CYP2D7A0A087X1C5 515 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 RASSF10A6NK89 507 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 TRIM37O94972 964 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 CXCR5P32302 372 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 BLIDQ8IZY5 108 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 RAPGEF5Q92565 580 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 PRCCQ92733 491 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 P3H4Q92791 437 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 RBM41Q96IZ5 413 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 SNX12Q9UMY4 172 aa12.69□□□□□ -0.38
SEC61A1-205ENST00000483956 EVI5O60447 810 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 TRIM21P19474 475 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 TUBP50607 506 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 PAK2Q13177 524 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 C8orf74Q6P047 294 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 CPLX4Q7Z7G2 160 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 ERICH1Q86X53 443 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 ARFGAP2Q8N6H7 521 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 SMCR8Q8TEV9 937 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 TEKT4Q8WW24 435 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 PLEKHG4BQ96PX9 1271 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 DUSP9Q99956 384 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 CUEDC2Q9H467 287 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 SUDS3Q9H7L9 328 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 TMEM165Q9HC07 324 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 XIRP1Q702N8 1843 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 CCT8L1PA6NM43 557 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 GLI1P08151 1106 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 PRLRP16471 622 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 SCNN1BP51168 640 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 ANKRD20A2Q5SQ80 823 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 ANKRD20A1Q5TYW2 823 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 ANKRD20A3Q5VUR7 823 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 FAM114A1Q8IWE2 563 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 ZSCAN29Q8IWY8 852 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 BIN2Q9UBW5 565 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 ABCF2Q9UG63 623 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 BLOC1S6Q9UL45 172 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 PCDHA4Q9UN74 947 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
SEC61A1-205ENST00000483956 BICDL2A1A5D9 508 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 NUTM2EB1AL46 878 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 M0R2N6 131 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 LAD1O00515 517 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 ADAMTS3O15072 1205 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 TNFRSF8P28908 595 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 HNRNPH3P31942 346 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 KIF5BP33176 963 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 PPP1R2P41236 205 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 MXRA7P84157 204 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 DTHD1Q6ZMT9 781 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 ERGIC2Q96RQ1 377 aa12.67□□□□□ -0.38
SEC61A1-205ENST00000483956 TMBIM4Q9HC24 238 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms