RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 VAV3Q9UKW4 847 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 IGLV3-22A0A075B6J6 115 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 TADA3O75528 432 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 RPA1P27694 616 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 HOXA7P31268 230 aaPredicted RBP14.45□□□□□ -0.1
SEC13-216ENST00000479868 ZNF76P36508 570 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 MEA1Q16626 185 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 ZNF569Q5MCW4 686 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 CCDC65Q8IXS2 484 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 SLC16A10Q8TF71 515 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 FBXO28Q9NVF7 368 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 FGFR1OPO95684 399 aaKnown RBP14.44□□□□□ -0.1
SEC13-216ENST00000479868 ZBED6P86452 979 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 PABPC4Q13310 644 aaKnown RBP eCLIP14.44□□□□□ -0.12e-9■□□□□ 8.8
SEC13-216ENST00000479868 MAN2A1Q16706 1144 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 HERC4Q5GLZ8 1057 aaPredicted RBP14.44□□□□□ -0.1
SEC13-216ENST00000479868 SLC30A10Q6XR72 485 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 ZNF397Q8NF99 534 aaPredicted RBP14.44□□□□□ -0.1
SEC13-216ENST00000479868 ERMNQ8TAM6 284 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 CHURC1Q8WUH1 139 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 TSG101Q99816 390 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 ABCB11O95342 1321 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 FRMD3A2A2Y4 597 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 EPHB6O15197 1021 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 UBXN2AP68543 259 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 CYP4A11Q02928 519 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 TSR1Q2NL82 804 aaKnown RBP14.44□□□□□ -0.1
SEC13-216ENST00000479868 KIF4BQ2VIQ3 1234 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 FOXR2Q6PJQ5 311 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 NELFCDQ8IXH7 590 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 SCFD1Q8WVM8 642 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 WDR18Q9BV38 432 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 PIM2Q9P1W9 311 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 SIK3Q9Y2K2 1263 aa14.44□□□□□ -0.1
SEC13-216ENST00000479868 EML1O00423 815 aa14.43□□□□□ -0.1
SEC13-216ENST00000479868 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
SEC13-216ENST00000479868 FIGNQ5HY92 759 aa14.43□□□□□ -0.1
SEC13-216ENST00000479868 SLC35F6Q8N357 371 aa14.43□□□□□ -0.1
SEC13-216ENST00000479868 MYOZ2Q9NPC6 264 aa14.43□□□□□ -0.1
SEC13-216ENST00000479868 TRIM10Q9UDY6 481 aa14.43□□□□□ -0.1
SEC13-216ENST00000479868 DNM3Q9UQ16 869 aa14.43□□□□□ -0.1
SEC13-216ENST00000479868 ATAD5Q96QE3 1844 aa14.43□□□□□ -0.1
SEC13-216ENST00000479868 PITPNM2Q9BZ72 1349 aa14.43□□□□□ -0.1
SEC13-216ENST00000479868 A0A1W2PQJ5 194 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 EFCAB8A8MWE9 144 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 GCOM1H8Y6P7 765 aaPredicted RBP14.42□□□□□ -0.1
SEC13-216ENST00000479868 TRAF5O00463 557 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 EGFRP00533 1210 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 POLR2MP0CAP2 368 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 FKBP3Q00688 224 aaKnown RBP14.42□□□□□ -0.1
SEC13-216ENST00000479868 MAP3K10Q02779 954 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 PPP2R3AQ06190 1150 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 GIT2Q14161 759 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 CIAPIN1Q6FI81 312 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 SYT2Q8N9I0 419 aaPredicted RBP14.42□□□□□ -0.1
SEC13-216ENST00000479868 UBXN4Q92575 508 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 ZHX3Q9H4I2 956 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 FAM207AQ9NSI2 230 aaPredicted RBP14.42□□□□□ -0.1
SEC13-216ENST00000479868 ZBTB7AO95365 584 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 CASP5P51878 434 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 HERVK_113P62684 666 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 TRAF1Q13077 416 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 CCDC155Q8N6L0 562 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
SEC13-216ENST00000479868 EIF2AK1Q9BQI3 630 aaKnown RBP14.42□□□□□ -0.1
SEC13-216ENST00000479868 REEP2Q9BRK0 252 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 KCTD10Q9H3F6 313 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 EMILIN3Q9NT22 766 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 RGL1Q9NZL6 768 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 TFR2Q9UP52 801 aa14.42□□□□□ -0.1
SEC13-216ENST00000479868 PLA2G6O60733 806 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 ASNSP08243 561 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 SH2D4AQ9H788 454 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 NHEJ1Q9H9Q4 299 aaPredicted RBP14.41□□□□□ -0.1
SEC13-216ENST00000479868 COL4A3BPQ9Y5P4 624 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 SPDYE4A6NLX3 237 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 PHF20L1A8MW92 1017 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 H2AFXP16104 143 aaPredicted RBP14.41□□□□□ -0.1
SEC13-216ENST00000479868 RASA3Q14644 834 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 FAM160B2Q86V87 743 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 LDHDQ86WU2 507 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 TAOK3Q9H2K8 898 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 BHMT2Q9H2M3 363 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 MMRN2Q9H8L6 949 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 ZNHIT6Q9NWK9 470 aaKnown RBP14.41□□□□□ -0.1
SEC13-216ENST00000479868 FEM1BQ9UK73 627 aa14.41□□□□□ -0.1
SEC13-216ENST00000479868 MRPL11Q9Y3B7 192 aaKnown RBP14.41□□□□□ -0.1
SEC13-216ENST00000479868 RBBP6Q7Z6E9 1792 aaKnown RBP14.41□□□□□ -0.1
SEC13-216ENST00000479868 INPP5BP32019 993 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 OTOP1Q7RTM1 612 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 JDP2Q8WYK2 163 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 POLR3CQ9BUI4 534 aaPredicted RBP14.4□□□□□ -0.1
SEC13-216ENST00000479868 ZNF341Q9BYN7 854 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 BCAS3Q9H6U6 928 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 GUCA1BQ9UMX6 200 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 CTAGE9A4FU28 777 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 CHMP2AO43633 222 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 PSMD10O75832 226 aa14.4□□□□□ -0.1
SEC13-216ENST00000479868 PLEKP08567 350 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms