RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 PCMTD1Q96MG8 357 aaPredicted RBP17.4■□□□□ 0.38
LINC00996-201ENST00000477392 FEZ1Q99689 392 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 VPS33BQ9H267 617 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 PITPNM2Q9BZ72 1349 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 RAD51AP2Q09MP3 1159 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 CCDC174Q6PII3 467 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 DEFB132Q7Z7B7 95 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 FAM83AQ86UY5 434 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 IQCDQ96DY2 449 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 MYO1AQ9UBC5 1043 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 TRIM10Q9UDY6 481 aa17.4■□□□□ 0.38
LINC00996-201ENST00000477392 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 MEIS1O00470 390 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 CAP2P40123 477 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 MIGA2Q7L4E1 593 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 TEX2Q8IWB9 1127 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 SCFD1Q8WVM8 642 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 WDR18Q9BV38 432 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 GLIS2Q9BZE0 524 aaPredicted RBP17.39■□□□□ 0.37
LINC00996-201ENST00000477392 KCTD10Q9H3F6 313 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 ZNF446Q9NWS9 450 aa17.39■□□□□ 0.37
LINC00996-201ENST00000477392 DDX41Q9UJV9 622 aaKnown RBP17.39■□□□□ 0.37
LINC00996-201ENST00000477392 BRCA1P38398 1863 aaKnown RBP17.39■□□□□ 0.37
LINC00996-201ENST00000477392 CDK17Q00537 523 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 FKBP3Q00688 224 aaKnown RBP17.38■□□□□ 0.37
LINC00996-201ENST00000477392 CXCL9Q07325 125 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
LINC00996-201ENST00000477392 HERC4Q5GLZ8 1057 aaPredicted RBP17.38■□□□□ 0.37
LINC00996-201ENST00000477392 ZC3H3Q8IXZ2 948 aaKnown RBP17.38■□□□□ 0.37
LINC00996-201ENST00000477392 COL4A3BPQ9Y5P4 624 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 CTAGE9A4FU28 777 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 EML1O00423 815 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 PLA2G6O60733 806 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 CFBP00751 764 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 HNRNPH3P31942 346 aaKnown RBP17.38■□□□□ 0.37
LINC00996-201ENST00000477392 CLCN6P51797 869 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 TRAF1Q13077 416 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 PABPC4Q13310 644 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00996-201ENST00000477392 GIT2Q14161 759 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 NELFCDQ8IXH7 590 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 SYT2Q8N9I0 419 aaPredicted RBP17.38■□□□□ 0.37
LINC00996-201ENST00000477392 CHURC1Q8WUH1 139 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 CEP63Q96MT8 703 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 NHEJ1Q9H9Q4 299 aaPredicted RBP17.38■□□□□ 0.37
LINC00996-201ENST00000477392 CDC23Q9UJX2 597 aa17.38■□□□□ 0.37
LINC00996-201ENST00000477392 SHTN1A0MZ66 631 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 TRAF5O00463 557 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 ERCC3P19447 782 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 CYLC1P35663 651 aaPredicted RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 ZNF76P36508 570 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 CBX1P83916 185 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 MAP3K10Q02779 954 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 NBPF9Q3BBW0 867 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 ZNF662Q6ZS27 426 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 CCDC84Q86UT8 332 aaPredicted RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 CCDC170Q8IYT3 715 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 NAPGQ99747 312 aaPredicted RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 REEP2Q9BRK0 252 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 HAUS4Q9H6D7 363 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 FAM207AQ9NSI2 230 aaPredicted RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 ZNHIT6Q9NWK9 470 aaKnown RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 TFR2Q9UP52 801 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 DNM3Q9UQ16 869 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 STK24Q9Y6E0 443 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 EIF3CLB5ME19 914 aaKnown RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 GCOM1H8Y6P7 765 aaPredicted RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 WNT10BO00744 389 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 KRT18P05783 430 aaKnown RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 POLR2MP0CAP2 368 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 CASP5P51878 434 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 CYP4A11Q02928 519 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 FAM160B2Q86V87 743 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 EIF3CQ99613 913 aaKnown RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 EIF2AK1Q9BQI3 630 aaKnown RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 POLR3CQ9BUI4 534 aaPredicted RBP17.37■□□□□ 0.37
LINC00996-201ENST00000477392 EMILIN3Q9NT22 766 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 FBXO28Q9NVF7 368 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 OGFRQ9NZT2 677 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 GUCA1BQ9UMX6 200 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 PLAGL2Q9UPG8 496 aa17.37■□□□□ 0.37
LINC00996-201ENST00000477392 BAG6P46379 1132 aa17.36■□□□□ 0.37
LINC00996-201ENST00000477392 MARSP56192 900 aaKnown RBP17.36■□□□□ 0.37
LINC00996-201ENST00000477392 TEX35Q5T0J7 233 aa17.36■□□□□ 0.37
LINC00996-201ENST00000477392 CCDC155Q8N6L0 562 aa17.36■□□□□ 0.37
LINC00996-201ENST00000477392 SLC16A10Q8TF71 515 aa17.36■□□□□ 0.37
LINC00996-201ENST00000477392 EPC1Q9H2F5 836 aa17.36■□□□□ 0.37
LINC00996-201ENST00000477392 SH2D4AQ9H788 454 aa17.36■□□□□ 0.37
LINC00996-201ENST00000477392 RCCD1A6NED2 376 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 PLEKP08567 350 aaPredicted RBP17.35■□□□□ 0.37
LINC00996-201ENST00000477392 KRT83P78385 493 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 AMPD2Q01433 879 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 KCNMA1Q12791 1236 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 TUBB2AQ13885 445 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 CCDC40Q4G0X9 1142 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 SLC30A10Q6XR72 485 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 SRGAP1Q7Z6B7 1085 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 SFR1Q86XK3 245 aa17.35■□□□□ 0.37
LINC00996-201ENST00000477392 BAP1Q92560 729 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms