RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 RMDN3Q96TC7 470 aa19.01■□□□□ 0.63
HPS4-210ENST00000473782 CCER2I3L3R5 266 aa19■□□□□ 0.63
HPS4-210ENST00000473782 EIF3JO75822 258 aaKnown RBP19■□□□□ 0.63
HPS4-210ENST00000473782 RRP1P56182 461 aaKnown RBP19■□□□□ 0.63
HPS4-210ENST00000473782 SP2Q02086 613 aa19■□□□□ 0.63
HPS4-210ENST00000473782 C11orf84Q9BUA3 381 aaPredicted RBP19■□□□□ 0.63
HPS4-210ENST00000473782 MAF1Q9H063 256 aa19■□□□□ 0.63
HPS4-210ENST00000473782 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
HPS4-210ENST00000473782 SORBS3O60504 671 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 CSPG5O95196 566 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 MMP1P03956 469 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 CTSHP09668 335 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 EIF2AK2P19525 551 aaKnown RBP18.99■□□□□ 0.63
HPS4-210ENST00000473782 SIGLEC14Q08ET2 396 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 COASYQ13057 564 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 ADGRD2Q7Z7M1 963 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 ATOH1Q92858 354 aaPredicted RBP18.99■□□□□ 0.63
HPS4-210ENST00000473782 ATP6V0A1Q93050 837 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 ZNF689Q96CS4 500 aaPredicted RBP18.99■□□□□ 0.63
HPS4-210ENST00000473782 UBA5Q9GZZ9 404 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 RNPEPQ9H4A4 650 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 BCAS3Q9H6U6 928 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 PLAGL2Q9UPG8 496 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 MRVI1Q9Y6F6 885 aa18.99■□□□□ 0.63
HPS4-210ENST00000473782 FAM186AA6NE01 2351 aa18.98■□□□□ 0.63
HPS4-210ENST00000473782 C17orf102A2RUQ5 167 aa18.98■□□□□ 0.63
HPS4-210ENST00000473782 H0Y858 1186 aa18.98■□□□□ 0.63
HPS4-210ENST00000473782 GLP2RO95838 553 aa18.98■□□□□ 0.63
HPS4-210ENST00000473782 NR3C2P08235 984 aa18.98■□□□□ 0.63
HPS4-210ENST00000473782 GOLGA8HP0CJ92 632 aa18.98■□□□□ 0.63
HPS4-210ENST00000473782 CELF3Q5SZQ8 465 aaKnown RBP18.98■□□□□ 0.63
HPS4-210ENST00000473782 PI4K2BQ8TCG2 481 aa18.98■□□□□ 0.63
HPS4-210ENST00000473782 TLR9Q9NR96 1032 aa18.98■□□□□ 0.63
HPS4-210ENST00000473782 OPLAHO14841 1288 aa18.97■□□□□ 0.63
HPS4-210ENST00000473782 PDGFBP01127 241 aaPredicted RBP18.97■□□□□ 0.63
HPS4-210ENST00000473782 SMIM10L2AP0DMW4 78 aa18.97■□□□□ 0.63
HPS4-210ENST00000473782 SMIM10L2BP0DMW5 78 aa18.97■□□□□ 0.63
HPS4-210ENST00000473782 FAM26DQ5JW98 314 aa18.97■□□□□ 0.63
HPS4-210ENST00000473782 GPKOWQ92917 476 aaPredicted RBP eCLIP18.97■□□□□ 0.63
HPS4-210ENST00000473782 PXMP2Q9NR77 195 aa18.97■□□□□ 0.63
HPS4-210ENST00000473782 MYH7BA7E2Y1 1941 aa18.97■□□□□ 0.63
HPS4-210ENST00000473782 ADGRA3Q8IWK6 1321 aa18.97■□□□□ 0.63
HPS4-210ENST00000473782 DNAH14Q0VDD8 3507 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 CAND2O75155 1236 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 NDUFV1P49821 464 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 ADAM17P78536 824 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 CDC37Q16543 378 aaPredicted RBP18.96■□□□□ 0.63
HPS4-210ENST00000473782 ARHGEF16Q5VV41 709 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 EFHBQ8N7U6 833 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 APBB2Q92870 758 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 SPATA33Q96N06 139 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 FSD1Q9BTV5 496 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 USP15Q9Y4E8 981 aaPredicted RBP18.96■□□□□ 0.63
HPS4-210ENST00000473782 ABCB11O95342 1321 aa18.96■□□□□ 0.63
HPS4-210ENST00000473782 GVINP1Q7Z2Y8 2422 aa18.95■□□□□ 0.62
HPS4-210ENST00000473782 H3BRB1 525 aa18.95■□□□□ 0.62
HPS4-210ENST00000473782 GGPS1O95749 300 aa18.95■□□□□ 0.62
HPS4-210ENST00000473782 CHRNA1P02708 482 aa18.95■□□□□ 0.62
HPS4-210ENST00000473782 ALX1Q15699 326 aa18.95■□□□□ 0.62
HPS4-210ENST00000473782 CRIPAKQ8N1N5 446 aa18.95■□□□□ 0.62
HPS4-210ENST00000473782 SPPL3Q8TCT6 385 aa18.95■□□□□ 0.62
HPS4-210ENST00000473782 TUT1Q9H6E5 874 aaKnown RBP18.95■□□□□ 0.62
HPS4-210ENST00000473782 BARX2Q9UMQ3 279 aaPredicted RBP18.95■□□□□ 0.62
HPS4-210ENST00000473782 RWDD3Q9Y3V2 267 aa18.95■□□□□ 0.62
HPS4-210ENST00000473782 WDR87Q6ZQQ6 2873 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 PRR23AA6NEV1 266 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 ENPP3O14638 875 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 ITGB1P05556 798 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 UBA1P22314 1058 aaKnown RBP18.94■□□□□ 0.62
HPS4-210ENST00000473782 ICAM3P32942 547 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 RRP12Q5JTH9 1297 aaKnown RBP18.94■□□□□ 0.62
HPS4-210ENST00000473782 ADGRF4Q8IZF3 695 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 SUSD6Q92537 303 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 TTC14Q96N46 770 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 PHF7Q9BWX1 381 aaPredicted RBP18.94■□□□□ 0.62
HPS4-210ENST00000473782 PLVAPQ9BX97 442 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 DCTPP1Q9H773 170 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 EHMT1Q9H9B1 1298 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 SUPT16HQ9Y5B9 1047 aaKnown RBP18.94■□□□□ 0.62
HPS4-210ENST00000473782 PCDHGC5Q9Y5F6 944 aa18.94■□□□□ 0.62
HPS4-210ENST00000473782 FGAP02671 866 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 LGALS2P05162 132 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 HSD17B4P51659 736 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 RBM10P98175 930 aaKnown RBP18.93■□□□□ 0.62
HPS4-210ENST00000473782 GHRHRQ02643 423 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 GPATCH4Q5T3I0 446 aaKnown RBP18.93■□□□□ 0.62
HPS4-210ENST00000473782 IL31RAQ8NI17 732 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 OTUD7AQ8TE49 926 aaPredicted RBP18.93■□□□□ 0.62
HPS4-210ENST00000473782 P2RX5Q93086 422 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 RPGRIP1Q96KN7 1286 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 PDCD2LQ9BRP1 358 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 IRF2BPLQ9H1B7 796 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 SETD4Q9NVD3 440 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 TELO2Q9Y4R8 837 aa18.93■□□□□ 0.62
HPS4-210ENST00000473782 DGKIO75912 1065 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 NBL1P41271 181 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 QRICH1Q2TAL8 776 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 ERMP1Q7Z2K6 904 aa18.92■□□□□ 0.62
HPS4-210ENST00000473782 VSIG10LQ86VR7 867 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms