RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 BNIP3Q12983 259 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 R3HDM1Q15032 1099 aaKnown RBP8.02□□□□□ -1.13
PTCD3-208ENST00000469585 GIMAP6Q6P9H5 292 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 CRTC3Q6UUV7 619 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 TMPRSS7Q7RTY8 843 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 STK11IPQ8N1F8 1099 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 LILRB2Q8N423 598 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 JMYQ8N9B5 988 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 LRRN4CLQ8ND94 238 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
PTCD3-208ENST00000469585 PFDN2Q9UHV9 154 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 AKT3Q9Y243 479 aa8.02□□□□□ -1.13
PTCD3-208ENST00000469585 IQCA1LA6NCM1 817 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 RNMTO43148 476 aaKnown RBP8.01□□□□□ -1.13
PTCD3-208ENST00000469585 TBX1O43435 398 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 POLD1P28340 1107 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 BMP8BP34820 402 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 CD96P40200 585 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 GRB10Q13322 594 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 PPP2R5DQ14738 602 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 MTHFSDQ2M296 383 aaKnown RBP8.01□□□□□ -1.13
PTCD3-208ENST00000469585 NFXL1Q6ZNB6 911 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 TRIM59Q8IWR1 403 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 LINC00116Q8NCU8 138 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 PIGBQ92521 554 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 PPP1R14AQ96A00 147 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 RUNDC1Q96C34 613 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 SPATA9Q9BWV2 254 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 TEX13AQ9BXU3 409 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-208ENST00000469585 CHMP4AQ9BY43 222 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 SLC52A2Q9HAB3 445 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 CCDC39Q9UFE4 941 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 DUSP13Q9UII6 198 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 SF3B6Q9Y3B4 125 aaKnown RBP8.01□□□□□ -1.13
PTCD3-208ENST00000469585 BTAF1O14981 1849 aa8.01□□□□□ -1.13
PTCD3-208ENST00000469585 BTBD11A6QL63 1104 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 AGRPO00253 132 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 ADCY3O60266 1144 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 STARD3NLO95772 234 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 PPP2R2AP63151 447 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 SSRP1Q08945 709 aaKnown RBP8□□□□□ -1.13
PTCD3-208ENST00000469585 SLC15A2Q16348 729 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 POMZP3Q6PJE2 187 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 SPRED2Q7Z698 418 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 LRRC47Q8N1G4 583 aaKnown RBP8□□□□□ -1.13
PTCD3-208ENST00000469585 ZDHHC15Q96MV8 337 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 SPON1Q9HCB6 807 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 LRP2BPQ9P2M1 347 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 SLC5A6Q9Y289 635 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 KDM2BQ8NHM5 1336 aa8□□□□□ -1.13
PTCD3-208ENST00000469585 COL3A1P02461 1466 aaPredicted RBP8□□□□□ -1.13
PTCD3-208ENST00000469585 NOP56O00567 594 aaKnown RBP7.99□□□□□ -1.13
PTCD3-208ENST00000469585 KCNH1O95259 989 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 CD8BP10966 210 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 RIPK4P57078 832 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 ZNF574Q6ZN55 896 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-208ENST00000469585 VSIG10LQ86VR7 867 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 JAZF1Q86VZ6 243 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 CREG2Q8IUH2 290 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 CRACR2BQ8N4Y2 399 aaPredicted RBP7.99□□□□□ -1.13
PTCD3-208ENST00000469585 FMNL2Q96PY5 1086 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 MCMBPQ9BTE3 642 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 PCDHA11Q9Y5I1 949 aa7.99□□□□□ -1.13
PTCD3-208ENST00000469585 VAMP4O75379 141 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 ZNF205O95201 554 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 VAV1P15498 845 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 PCBP3P57721 371 aaKnown RBP7.98□□□□□ -1.13
PTCD3-208ENST00000469585 POU4F1Q01851 419 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 TAF7Q15545 349 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-208ENST00000469585 CWF19L1Q69YN2 538 aaKnown RBP7.98□□□□□ -1.13
PTCD3-208ENST00000469585 RNPC3Q96LT9 517 aaKnown RBP7.98□□□□□ -1.13
PTCD3-208ENST00000469585 SLC12A9Q9BXP2 914 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 FOXP3Q9BZS1 431 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 ARHGEF4Q9NR80 690 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 LMCD1Q9NZU5 365 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 TCFL5Q9UL49 500 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 ASAP1Q9ULH1 1129 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 ZNF281Q9Y2X9 895 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 SHANK3Q9BYB0 1731 aa7.98□□□□□ -1.13
PTCD3-208ENST00000469585 NPHP1O15259 732 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 ADAMTS4O75173 837 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 SYPP08247 313 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 RFC4P35249 363 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 GRIA2P42262 883 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 AMPD2Q01433 879 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 TEKQ02763 1124 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 EGR3Q06889 387 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 IKZF1Q13422 519 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 RTP2Q5QGT7 225 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 ZMYM1Q5SVZ6 1142 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 GTF2IRD2BQ6EKJ0 949 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 RNF111Q6ZNA4 994 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 GTF2IRD2Q86UP8 949 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 CCDC146Q8IYE0 955 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 NGEFQ8N5V2 710 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 ZBTB38Q8NAP3 1195 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-208ENST00000469585 THAP3Q8WTV1 239 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-208ENST00000469585 BTN2A2Q8WVV5 523 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 FCRL3Q96P31 734 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-208ENST00000469585 NKX2-4Q9H2Z4 354 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms