RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 GSTM1P09488 218 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 CORO7P57737 925 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 CYP4F8P98187 520 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 RAPGEF1Q13905 1077 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 NR1I3Q14994 352 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 E2F5Q15329 346 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 ZYXQ15942 572 aaKnown RBP6.75□□□□□ -1.33
LRCH3-212ENST00000466845 ZNF385BQ569K4 471 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 HSP90B2PQ58FF3 399 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 RTP2Q5QGT7 225 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 DCAF15Q66K64 600 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 HEATR6Q6AI08 1181 aaKnown RBP6.75□□□□□ -1.33
LRCH3-212ENST00000466845 KLHL10Q6JEL2 608 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 CRTC3Q6UUV7 619 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 RUFY4Q6ZNE9 571 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 PPFIBP1Q86W92 1011 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 CHCHD4Q8N4Q1 142 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 FIBCD1Q8N539 461 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 NLGN2Q8NFZ4 835 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 RELTQ969Z4 430 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 CCDC94Q9BW85 323 aaPredicted RBP6.75□□□□□ -1.33
LRCH3-212ENST00000466845 CCSER2Q9H7U1 834 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 ASAP1Q9ULH1 1129 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 MINPP1Q9UNW1 487 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 GPR55Q9Y2T6 319 aaPredicted RBP6.75□□□□□ -1.33
LRCH3-212ENST00000466845 ZNF451Q9Y4E5 1061 aa6.75□□□□□ -1.33
LRCH3-212ENST00000466845 CCDC163A0A0D9SF12 145 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 MYOCOSA0A1B0GUC4 107 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 A0A1W2PQH9 124 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 TRIM64CA6NLI5 447 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 RFXAPO00287 272 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 TBX3O15119 743 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 TP53P04637 393 aaPredicted RBP6.74□□□□□ -1.33
LRCH3-212ENST00000466845 ZNF143P52747 638 aaPredicted RBP6.74□□□□□ -1.33
LRCH3-212ENST00000466845 NAP1L1P55209 391 aaKnown RBP6.74□□□□□ -1.33
LRCH3-212ENST00000466845 CBX2Q14781 532 aaPredicted RBP6.74□□□□□ -1.33
LRCH3-212ENST00000466845 TMEM95Q3KNT9 176 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 TDRD10Q5VZ19 366 aaKnown RBP6.74□□□□□ -1.33
LRCH3-212ENST00000466845 IQCEQ6IPM2 695 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 ZPBP2Q6X784 338 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 UBE2Q1Q7Z7E8 422 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 JAMLQ86YT9 394 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 C1QL4Q86Z23 238 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 TMEM151BQ8IW70 566 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 NDUFAF2Q8N183 169 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 FAM43AQ8N2R8 423 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 RCC1LQ96I51 464 aaKnown RBP6.74□□□□□ -1.33
LRCH3-212ENST00000466845 GMLQ99445 158 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 CAPN10Q9HC96 672 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 CLIC5Q9NZA1 410 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 SUN2Q9UH99 717 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 POLG2Q9UHN1 485 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 INPP5FQ9Y2H2 1132 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 NUP160Q12769 1436 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 LTBP3Q9NS15 1303 aa6.74□□□□□ -1.33
LRCH3-212ENST00000466845 ENPP3O14638 875 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 FGF10O15520 208 aaPredicted RBP6.73□□□□□ -1.33
LRCH3-212ENST00000466845 PLIN1O60240 522 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 VAMP4O75379 141 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 U2AF1L5P0DN76 240 aaPredicted RBP6.73□□□□□ -1.33
LRCH3-212ENST00000466845 PRKCAP17252 672 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 TRAPPC10P48553 1259 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 NASPP49321 788 aaPredicted RBP6.73□□□□□ -1.33
LRCH3-212ENST00000466845 ZNF132P52740 706 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 LINC00310P59036 64 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
LRCH3-212ENST00000466845 U2AF1Q01081 240 aaKnown RBP eCLIP6.73□□□□□ -1.335e-6■□□□□ 10.8
LRCH3-212ENST00000466845 DNTTIP2Q5QJE6 756 aaKnown RBP6.73□□□□□ -1.33
LRCH3-212ENST00000466845 SPOCD1Q6ZMY3 1216 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 CCDC81Q6ZN84 652 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 CCDC73Q6ZRK6 1079 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 SUGP1Q8IWZ8 645 aaKnown RBP6.73□□□□□ -1.33
LRCH3-212ENST00000466845 SIRT2Q8IXJ6 389 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 TMEM52Q8NDY8 209 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 SHDQ96IW2 340 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 CDHR1Q96JP9 859 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 HAUS7Q99871 368 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 PDCL3Q9H2J4 239 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 RAPGEFL1Q9UHV5 662 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 TMCC3Q9ULS5 477 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 CUL7Q14999 1698 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 KIF27Q86VH2 1401 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 ARID1BQ8NFD5 2236 aaPredicted RBP6.73□□□□□ -1.33
LRCH3-212ENST00000466845 FANCIQ9NVI1 1328 aa6.73□□□□□ -1.33
LRCH3-212ENST00000466845 TRBV23OR9-2A0A075B6M9 112 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 H0Y8X5 98 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 MPHOSPH10O00566 681 aaKnown RBP6.72□□□□□ -1.33
LRCH3-212ENST00000466845 KIF1CO43896 1103 aaKnown RBP6.72□□□□□ -1.33
LRCH3-212ENST00000466845 ZSCAN22P10073 491 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-212ENST00000466845 NEFHP12036 1026 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 PAX7P23759 505 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 GRB10Q13322 594 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 GNL2Q13823 731 aaKnown RBP6.72□□□□□ -1.33
LRCH3-212ENST00000466845 DCTN1Q14203 1278 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 C10orf62Q5T681 223 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-212ENST00000466845 EEF1DP3Q658K8 133 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 RCSD1Q6JBY9 416 aa6.72□□□□□ -1.33
LRCH3-212ENST00000466845 CRACR2BQ8N4Y2 399 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-212ENST00000466845 PRPF38AQ8NAV1 312 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms