RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 FZD9O00144 591 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 BBOX1O75936 387 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 NBPF7P0C2Y1 421 aaPredicted RBP6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 CYP7A1P22680 504 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 KIR3DL1P43629 444 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 AFMP43652 599 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 ST13P50502 369 aaKnown RBP6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 CTSWP56202 376 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 TAF1CQ15572 869 aaPredicted RBP6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 MLANAQ16655 118 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 SOGA3Q5TF21 947 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 SLC4A10Q6U841 1118 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 MCATQ8IVS2 390 aaKnown RBP6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 KSR1Q8IVT5 923 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 RTKN2Q8IZC4 609 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 PHC3Q8NDX5 983 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 LINS1Q8NG48 757 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 LIN37Q96GY3 246 aaPredicted RBP6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 COX4I2Q96KJ9 171 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 FAM161BQ96MY7 647 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 NOC4LQ9BVI4 516 aaKnown RBP6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 RTFDC1Q9BY42 306 aaPredicted RBP6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 ZSWIM5Q9P217 1185 aa6.08□□□□□ -1.44
EXOSC3-204ENST00000465860 POLR2AP24928 1970 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 SHTN1A0MZ66 631 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 SNAP23O00161 211 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 BCAR3O75815 825 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 CSF1RP07333 972 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 RLBP1P12271 317 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 GDNFP39905 211 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 RARSP54136 660 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 RPS8P62241 208 aaKnown RBP6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 PDE4BQ07343 736 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 NEXNQ0ZGT2 675 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 TMC4Q7Z404 712 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 DNAJB8Q8NHS0 232 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 Q96M66 194 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 FAM53CQ9NYF3 392 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 CORINQ9Y5Q5 1042 aa6.07□□□□□ -1.44
EXOSC3-204ENST00000465860 DBX1A6NMT0 343 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 WASH4PA8MWX3 477 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 PPIP5K2O43314 1243 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 GLI1P08151 1106 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 KLRK1P26718 216 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 HTRA3P83110 453 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 KIAA2012Q0VF49 1180 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 CCDC152Q4G0S7 254 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 DPP8Q6V1X1 898 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 BNC2Q6ZN30 1099 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 FBXO33Q7Z6M2 555 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 TBC1D16Q8TBP0 767 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 SUCLG2Q96I99 432 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 KIRREL1Q96J84 757 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 FAM84AQ96KN4 292 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 ALPK1Q96QP1 1244 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 SLC38A3Q99624 504 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 PLA2G12BQ9BX93 195 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 CHMP4AQ9BY43 222 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 SMC4Q9NTJ3 1288 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 ADAM30Q9UKF2 790 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 NOB1Q9ULX3 412 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 RTL9Q8NET4 1388 aa6.06□□□□□ -1.44
EXOSC3-204ENST00000465860 UTYO14607 1347 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 KDM2BQ8NHM5 1336 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 UPK3BL1B0FP48 263 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 UPK3BL2E5RIL1 263 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 GRM8O00222 908 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 RAD17O75943 681 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 TOMM70O94826 608 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 ESR1P03372 595 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 VEGFAP15692 232 aaPredicted RBP6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 ETV3P41162 512 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 EPS15P42566 896 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 CXCL9Q07325 125 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 PKN1Q16512 942 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 ALDH1L2Q3SY69 923 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 LMBR1LQ6UX01 489 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 PRR23BQ6ZRT6 265 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 ANKRD44Q8N8A2 993 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 PIWIL2Q8TC59 973 aaKnown RBP6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 PPP1R13LQ8WUF5 828 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 PUS3Q9BZE2 481 aaKnown RBP6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 USP44Q9H0E7 712 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 BICC1Q9H694 974 aaKnown RBP6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 DBNDD1Q9H9R9 158 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 PODXL2Q9NZ53 605 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 SLAMF8Q9P0V8 285 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 MINPP1Q9UNW1 487 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 CEP131Q9UPN4 1083 aa6.05□□□□□ -1.44
EXOSC3-204ENST00000465860 PTPRCP08575 1304 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 IRS2Q9Y4H2 1338 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 FAM221AA4D161 298 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 CILPO75339 1184 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 TAF5LO75529 589 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 ALDH1L1O75891 902 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 PF4P02776 101 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 PLCG1P19174 1290 aa6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 TAGLNQ01995 201 aaKnown RBP6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 CAMK2GQ13555 558 aaPredicted RBP6.04□□□□□ -1.44
EXOSC3-204ENST00000465860 TMEM67Q5HYA8 995 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms