RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 DUOXA2Q1HG44 320 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 MCMDC2Q4G0Z9 681 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 CTR9Q6PD62 1173 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 C16orf86Q6ZW13 317 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 TTC6Q86TZ1 520 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 ERO1BQ86YB8 467 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 MAPKAPK5Q8IW41 473 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 SDR42E1Q8WUS8 393 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 PMEPA1Q969W9 287 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 KLHDC7BQ96G42 594 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 CLMNQ96JQ2 1002 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 CAPNS2Q96L46 248 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 MYRFLQ96LU7 910 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 ARPP21Q9UBL0 812 aaPredicted RBP6.86□□□□□ -1.31
VPS36-202ENST00000462289 SERPINB13Q9UIV8 391 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 ANGEL1Q9UNK9 670 aaKnown RBP6.86□□□□□ -1.31
VPS36-202ENST00000462289 FZD1Q9UP38 647 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.86□□□□□ -1.31
VPS36-202ENST00000462289 DOCK3Q8IZD9 2030 aa6.86□□□□□ -1.31
VPS36-202ENST00000462289 MGAMO43451 1857 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 WDR33Q9C0J8 1336 aaKnown RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 IGKV6D-41A0A0C4DH26 115 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 KIAA1324LA8MWY0 1029 aaPredicted RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 DDX3YO15523 660 aaKnown RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 SGSM2O43147 1006 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 HSPD1P10809 573 aaKnown RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 ACPPP15309 386 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 PCSK2P16519 638 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 MPSTP25325 297 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 CDC25BP30305 580 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 ECE1P42892 770 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 EIF1AXP47813 144 aaKnown RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 NT5C2P49902 561 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 DNM1Q05193 864 aaKnown RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 PPATQ06203 517 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 PPIL2Q13356 520 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 PICALMQ13492 652 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 VPS53Q5VIR6 699 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 SKAP1Q86WV1 359 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 SCYL3Q8IZE3 742 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 IFNL3Q8IZI9 196 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 UTP4Q969X6 686 aaKnown RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 WNK4Q96J92 1243 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 WRNIP1Q96S55 665 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 WDR18Q9BV38 432 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 DSCC1Q9BVC3 393 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 ZCCHC17Q9NP64 241 aaKnown RBP6.85□□□□□ -1.31
VPS36-202ENST00000462289 PCMTD2Q9NV79 361 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 SWAP70Q9UH65 585 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 SOX13Q9UN79 622 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 AFG3L2Q9Y4W6 797 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 TACC3Q9Y6A5 838 aa6.85□□□□□ -1.31
VPS36-202ENST00000462289 ADGRA2Q96PE1 1338 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 CXCL11O14625 94 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 EPB41L2O43491 1005 aaKnown RBP6.84□□□□□ -1.31
VPS36-202ENST00000462289 ORC4O43929 436 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 FGAP02671 866 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 CYP2D6P10635 497 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.31
VPS36-202ENST00000462289 INHBEP58166 350 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 CYP4F22Q6NT55 531 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 CCDC129Q6ZRS4 1044 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 MIGA2Q7L4E1 593 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 ZDHHC13Q8IUH4 622 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 SIAH1Q8IUQ4 282 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 UBASH3BQ8TF42 649 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 GTF3C2Q8WUA4 911 aaPredicted RBP6.84□□□□□ -1.31
VPS36-202ENST00000462289 ZKSCAN4Q969J2 545 aaPredicted RBP6.84□□□□□ -1.31
VPS36-202ENST00000462289 IL17RAQ96F46 866 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 C12orf42Q96LP6 360 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 KRTAP4-12Q9BQ66 201 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 MCM9Q9NXL9 1143 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 SAGE1Q9NXZ1 904 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 ABT1Q9ULW3 272 aaKnown RBP6.84□□□□□ -1.31
VPS36-202ENST00000462289 SYNPO2Q9UMS6 1093 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 SLC4A4Q9Y6R1 1079 aa6.84□□□□□ -1.31
VPS36-202ENST00000462289 CASP8AP2Q9UKL3 1982 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 A0A0G2JLL6 359 aaPredicted RBP6.83□□□□□ -1.32
VPS36-202ENST00000462289 A6NHS1 94 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 MANSC4A6NHS7 340 aaPredicted RBP6.83□□□□□ -1.32
VPS36-202ENST00000462289 PDE2AO00408 941 aaPredicted RBP6.83□□□□□ -1.32
VPS36-202ENST00000462289 TGFB1P01137 390 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 HLA-DOAP06340 250 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 ASNSP08243 561 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 SSTR4P31391 388 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 USP5P45974 858 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 CDK8P49336 464 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 ZNF157P51786 506 aaPredicted RBP6.83□□□□□ -1.32
VPS36-202ENST00000462289 SHROOM1Q2M3G4 852 aaPredicted RBP6.83□□□□□ -1.32
VPS36-202ENST00000462289 ANKRD34AQ69YU3 496 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 ALKBH2Q6NS38 261 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 PRRT2Q7Z6L0 340 aaPredicted RBP6.83□□□□□ -1.32
VPS36-202ENST00000462289 MAP4K1Q92918 833 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 KCNB2Q92953 911 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 OPTNQ96CV9 577 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 CCDC17Q96LX7 622 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 PTPN18Q99952 460 aa6.83□□□□□ -1.32
VPS36-202ENST00000462289 LSG1Q9H089 658 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms