RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 TFR2Q9UP52 801 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 SIK3Q9Y2K2 1263 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 ABCB11O95342 1321 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 EPHB6O15197 1021 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 SPATA31C1P0DKV0 1188 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 HOXA7P31268 230 aaPredicted RBP22.44■■□□□ 1.18
PDCD2-204ENST00000453163 CIITAP33076 1130 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 HERVK_113P62684 666 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 BMS1Q14692 1282 aaKnown RBP22.44■■□□□ 1.18
PDCD2-204ENST00000453163 HERC4Q5GLZ8 1057 aaPredicted RBP22.44■■□□□ 1.18
PDCD2-204ENST00000453163 FIGNQ5HY92 759 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 NELFCDQ8IXH7 590 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 TBC1D5Q92609 795 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 EPC1Q9H2F5 836 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 PIK3CDO00329 1044 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 SLC26A4O43511 780 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 DEFB132Q7Z7B7 95 aa22.44■■□□□ 1.18
PDCD2-204ENST00000453163 FAM207AQ9NSI2 230 aaPredicted RBP22.44■■□□□ 1.18
PDCD2-204ENST00000453163 CFBP00751 764 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 KRT18P05783 430 aaKnown RBP22.43■■□□□ 1.18
PDCD2-204ENST00000453163 ERMNQ8TAM6 284 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 VAV3Q9UKW4 847 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 A0A1W2PQJ5 194 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 CTAGE9A4FU28 777 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 RPA1P27694 616 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 ZNF76P36508 570 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 PABPC4Q13310 644 aaKnown RBP eCLIP22.43■■□□□ 1.189e-8■■□□□ 12.4
PDCD2-204ENST00000453163 KIF4BQ2VIQ3 1234 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 SAMD1Q6SPF0 538 aaPredicted RBP22.43■■□□□ 1.18
PDCD2-204ENST00000453163 FAM20AQ96MK3 541 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 GLIS2Q9BZE0 524 aaPredicted RBP22.43■■□□□ 1.18
PDCD2-204ENST00000453163 ZHX3Q9H4I2 956 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 ZNHIT6Q9NWK9 470 aaKnown RBP22.43■■□□□ 1.18
PDCD2-204ENST00000453163 GUCA1BQ9UMX6 200 aa22.43■■□□□ 1.18
PDCD2-204ENST00000453163 TRAF5O00463 557 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 CLCN6P51797 869 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 CYP4A11Q02928 519 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 TEX35Q5T0J7 233 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 FOXR2Q6PJQ5 311 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 CCDC84Q86UT8 332 aaPredicted RBP22.42■■□□□ 1.18
PDCD2-204ENST00000453163 NHEJ1Q9H9Q4 299 aaPredicted RBP22.42■■□□□ 1.18
PDCD2-204ENST00000453163 ST7Q9NRC1 585 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 ZNRF3Q9ULT6 936 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 FKBP3Q00688 224 aaKnown RBP22.42■■□□□ 1.18
PDCD2-204ENST00000453163 SCFD1Q8WVM8 642 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 SCAF8Q9UPN6 1271 aaKnown RBP22.42■■□□□ 1.18
PDCD2-204ENST00000453163 FHOD1Q9Y613 1164 aa22.42■■□□□ 1.18
PDCD2-204ENST00000453163 FRMD3A2A2Y4 597 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 CYP3A4P08684 503 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 SLC30A10Q6XR72 485 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 NIM1KQ8IY84 436 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 CCDC155Q8N6L0 562 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 ZSWIM4Q9H7M6 989 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 VCPKMTQ9H867 229 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 IGLV3-22A0A075B6J6 115 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 CCDC66A2RUB6 948 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 TFRCP02786 760 aaKnown RBP22.41■■□□□ 1.18
PDCD2-204ENST00000453163 RSRC2Q7L4I2 434 aaKnown RBP22.41■■□□□ 1.18
PDCD2-204ENST00000453163 RANBP17Q9H2T7 1088 aaKnown RBP22.41■■□□□ 1.18
PDCD2-204ENST00000453163 MMRN2Q9H8L6 949 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 MYO1AQ9UBC5 1043 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 CDC23Q9UJX2 597 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 COL4A3BPQ9Y5P4 624 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 PITPNM2Q9BZ72 1349 aa22.41■■□□□ 1.18
PDCD2-204ENST00000453163 NAPGQ99747 312 aaPredicted RBP22.4■■□□□ 1.18
PDCD2-204ENST00000453163 FBXO28Q9NVF7 368 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 DNM3Q9UQ16 869 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 UTRNP46939 3433 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 EML1O00423 815 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 CYLC1P35663 651 aaPredicted RBP22.4■■□□□ 1.18
PDCD2-204ENST00000453163 NBPF9Q3BBW0 867 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 FKBP1CQ5VVH2 108 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 WDR18Q9BV38 432 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 TANGO6Q9C0B7 1094 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 EMILIN3Q9NT22 766 aa22.4■■□□□ 1.18
PDCD2-204ENST00000453163 SHTN1A0MZ66 631 aa22.39■■□□□ 1.18
PDCD2-204ENST00000453163 PLEKP08567 350 aaPredicted RBP22.39■■□□□ 1.18
PDCD2-204ENST00000453163 CAP2P40123 477 aa22.39■■□□□ 1.18
PDCD2-204ENST00000453163 UBXN2AP68543 259 aa22.39■■□□□ 1.18
PDCD2-204ENST00000453163 CXCL9Q07325 125 aa22.39■■□□□ 1.18
PDCD2-204ENST00000453163 CCDC40Q4G0X9 1142 aa22.39■■□□□ 1.18
PDCD2-204ENST00000453163 SYT2Q8N9I0 419 aaPredicted RBP22.39■■□□□ 1.18
PDCD2-204ENST00000453163 AGBL3Q8NEM8 1001 aa22.39■■□□□ 1.18
PDCD2-204ENST00000453163 REEP2Q9BRK0 252 aa22.39■■□□□ 1.18
PDCD2-204ENST00000453163 KCTD10Q9H3F6 313 aa22.39■■□□□ 1.18
PDCD2-204ENST00000453163 ATAD5Q96QE3 1844 aa22.39■■□□□ 1.17
PDCD2-204ENST00000453163 TBC1D12O60347 775 aa22.39■■□□□ 1.17
PDCD2-204ENST00000453163 CASP5P51878 434 aa22.39■■□□□ 1.17
PDCD2-204ENST00000453163 GIT2Q14161 759 aa22.39■■□□□ 1.17
PDCD2-204ENST00000453163 CHURC1Q8WUH1 139 aa22.39■■□□□ 1.17
PDCD2-204ENST00000453163 HAUS4Q9H6D7 363 aa22.39■■□□□ 1.17
PDCD2-204ENST00000453163 PUF60Q9UHX1 559 aaKnown RBP22.39■■□□□ 1.17
PDCD2-204ENST00000453163 RBBP6Q7Z6E9 1792 aaKnown RBP22.38■■□□□ 1.17
PDCD2-204ENST00000453163 KRT83P78385 493 aa22.38■■□□□ 1.17
PDCD2-204ENST00000453163 CCDC122Q5T0U0 273 aa22.38■■□□□ 1.17
PDCD2-204ENST00000453163 FAM83AQ86UY5 434 aa22.38■■□□□ 1.17
PDCD2-204ENST00000453163 MTMR14Q8NCE2 650 aa22.38■■□□□ 1.17
PDCD2-204ENST00000453163 SMCR8Q8TEV9 937 aaPredicted RBP22.38■■□□□ 1.17
PDCD2-204ENST00000453163 IQCDQ96DY2 449 aa22.38■■□□□ 1.17
PDCD2-204ENST00000453163 RGL1Q9NZL6 768 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms