RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 USP33Q8TEY7 942 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 EPB41L4BQ9H329 900 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 ZNF552Q9H707 407 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-213ENST00000433709 MARCH2Q9P0N8 246 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 TIMM13Q9Y5L4 95 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-213ENST00000433709 NPFFR2Q9Y5X5 522 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 NUP155O75694 1391 aa8.04□□□□□ -1.12
HDAC9-213ENST00000433709 TET3O43151 1660 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 SYNMO15061 1565 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 TRBV23-1A0A0A0MS06 115 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 KCNA6P17658 529 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 BCL6P41182 706 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 RPL11P62913 178 aaKnown RBP8.03□□□□□ -1.12
HDAC9-213ENST00000433709 RAB3GAP1Q15042 981 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 KCNT2Q6UVM3 1135 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 TEX2Q8IWB9 1127 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 PHF20Q9BVI0 1012 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 RXFP1Q9HBX9 757 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 KLHL14Q9P2G3 628 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 FBXL7Q9UJT9 491 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 PCDHA2Q9Y5H9 948 aa8.03□□□□□ -1.12
HDAC9-213ENST00000433709 UNC13BO14795 1591 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 DISP3Q9P2K9 1392 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 MSCO60682 206 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 DBHP09172 617 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 MESP2Q0VG99 397 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 LONRF2Q1L5Z9 754 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 ZNF648Q5T619 568 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-213ENST00000433709 JMYQ8N9B5 988 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 PLEKHO2Q8TD55 490 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 THAP3Q8WTV1 239 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-213ENST00000433709 IPO9Q96P70 1041 aaKnown RBP8.02□□□□□ -1.13
HDAC9-213ENST00000433709 KANSL2Q9H9L4 492 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.02□□□□□ -1.13
HDAC9-213ENST00000433709 TBX22Q9Y458 520 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 ADGRB3O60242 1522 aa8.02□□□□□ -1.13
HDAC9-213ENST00000433709 RRBP1Q9P2E9 1410 aaKnown RBP8.02□□□□□ -1.13
HDAC9-213ENST00000433709 PIK3C2BO00750 1634 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 MYOCOSA0A1B0GUC4 107 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 C22orf46C9J442 243 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 MYO1BO43795 1136 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 GLI4P10075 376 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 FPR2P25090 351 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 YBX1P67809 324 aaKnown RBP8.01□□□□□ -1.13
HDAC9-213ENST00000433709 C2orf27AQ580R0 203 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 RPTNQ6XPR3 784 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 CEP68Q76N32 757 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 NLRP10Q86W26 655 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 DCAF4Q8WV16 495 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 DHRS4Q9BTZ2 278 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 HCFC2Q9Y5Z7 792 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 NCOA3Q9Y6Q9 1424 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 GCC2Q8IWJ2 1684 aa8.01□□□□□ -1.13
HDAC9-213ENST00000433709 PIK3R4Q99570 1358 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 PLEKHG1Q9ULL1 1385 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 ZC3H12DA2A288 527 aaKnown RBP8□□□□□ -1.13
HDAC9-213ENST00000433709 SRGAP3O43295 1099 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 FARP2O94887 1054 aaPredicted RBP8□□□□□ -1.13
HDAC9-213ENST00000433709 NTRK1P04629 796 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 CYBBP04839 570 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 SUMO1P63165 101 aaKnown RBP8□□□□□ -1.13
HDAC9-213ENST00000433709 CBX2Q14781 532 aaPredicted RBP8□□□□□ -1.13
HDAC9-213ENST00000433709 PAQR3Q6TCH7 311 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 FBXO15Q8NCQ5 510 aaPredicted RBP8□□□□□ -1.13
HDAC9-213ENST00000433709 CHAMP1Q96JM3 812 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 SLC26A8Q96RN1 970 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 MCOLN1Q9GZU1 580 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 GPR27Q9NS67 375 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 MRPS23Q9Y3D9 190 aaKnown RBP8□□□□□ -1.13
HDAC9-213ENST00000433709 PTCH2Q9Y6C5 1203 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 NKTRP30414 1462 aaKnown RBP8□□□□□ -1.13
HDAC9-213ENST00000433709 IQGAP3Q86VI3 1631 aa8□□□□□ -1.13
HDAC9-213ENST00000433709 LRRC7Q96NW7 1537 aa7.99□□□□□ -1.13
HDAC9-213ENST00000433709 F8W031 263 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-213ENST00000433709 C6orf222P0C671 652 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-213ENST00000433709 VIPR1P32241 457 aa7.99□□□□□ -1.13
HDAC9-213ENST00000433709 SRSF3P84103 164 aaKnown RBP7.99□□□□□ -1.13
HDAC9-213ENST00000433709 LSAMPQ13449 338 aa7.99□□□□□ -1.13
HDAC9-213ENST00000433709 STYK1Q6J9G0 422 aa7.99□□□□□ -1.13
HDAC9-213ENST00000433709 POU5F2Q8N7G0 328 aa7.99□□□□□ -1.13
HDAC9-213ENST00000433709 KISS1RQ969F8 398 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-213ENST00000433709 TMEM169Q96HH4 297 aa7.99□□□□□ -1.13
HDAC9-213ENST00000433709 RIMS2Q9UQ26 1411 aa7.99□□□□□ -1.13
HDAC9-213ENST00000433709 TRAF6Q9Y4K3 522 aa7.99□□□□□ -1.13
HDAC9-213ENST00000433709 CFAP65Q6ZU64 1925 aaKnown RBP7.99□□□□□ -1.13
HDAC9-213ENST00000433709 MSH6P52701 1360 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 PEX10O60683 326 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 GTF2A2P52657 109 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 NR1I3Q14994 352 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 WWC2Q6AWC2 1192 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 TMEM132EQ6IEE7 984 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 RSPO2Q6UXX9 243 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-213ENST00000433709 SYDE1Q6ZW31 735 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-213ENST00000433709 CABP7Q86V35 215 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 ZSWIM2Q8NEG5 633 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 SH3TC2Q8TF17 1288 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 TRMT2BQ96GJ1 504 aaKnown RBP7.98□□□□□ -1.13
HDAC9-213ENST00000433709 FAM84AQ96KN4 292 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 SGPP1Q9BX95 441 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 CLDND1Q9NY35 253 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms