RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HLA-DOAP06340 250 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 ZBTB48P10074 688 aaPredicted RBP5.83□□□□□ -1.48
VPS41-205ENST00000414632 PLCD1P51178 756 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 GPLD1P80108 840 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 ATP11AP98196 1134 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 SREBF2Q12772 1141 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 PPIL2Q13356 520 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 UBE3CQ15386 1083 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 ZSCAN25Q6NSZ9 544 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 Q6ZNB5 142 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 ANKS3Q6ZW76 656 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 ERO1BQ86YB8 467 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 SCYL3Q8IZE3 742 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 SLC44A5Q8NCS7 719 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 BRI3BPQ8WY22 251 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 OSBP2Q969R2 916 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 RILPL2Q969X0 211 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 DYNLL2Q96FJ2 89 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 GMCL1Q96IK5 515 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 POP1Q99575 1024 aaKnown RBP5.83□□□□□ -1.48
VPS41-205ENST00000414632 PTPN18Q99952 460 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 ZNF576Q9H609 170 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 DCP1AQ9NPI6 582 aaPredicted RBP5.83□□□□□ -1.48
VPS41-205ENST00000414632 PICK1Q9NRD5 415 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 MCM9Q9NXL9 1143 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 ZNF112Q9UJU3 913 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 PRR12Q9ULL5 1215 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 STRIP2Q9ULQ0 834 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 ZHX2Q9Y6X8 837 aa5.83□□□□□ -1.48
VPS41-205ENST00000414632 TRIM75PA6NK02 468 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 ST8SIA5O15466 376 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 GPAA1O43292 621 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 PTPRAP18433 802 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 CDK11BP21127 795 aaKnown RBP5.82□□□□□ -1.48
VPS41-205ENST00000414632 FGFR3P22607 806 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 TM4SF4P48230 202 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 GTF2A2P52657 109 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 RPS26P62854 115 aaKnown RBP5.82□□□□□ -1.48
VPS41-205ENST00000414632 CTBSQ01459 385 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 SERINC3Q13530 473 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 SEZ6Q53EL9 994 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 NOL9Q5SY16 702 aaKnown RBP5.82□□□□□ -1.48
VPS41-205ENST00000414632 PCNX4Q63HM2 1172 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 GADL1Q6ZQY3 521 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 FAM43AQ8N2R8 423 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 APPBP2Q92624 585 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 NKD1Q969G9 470 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 ANAPC16Q96DE5 110 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 ZNF837Q96EG3 531 aaPredicted RBP5.82□□□□□ -1.48
VPS41-205ENST00000414632 MRFAP1L1Q96HT8 127 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 DHX36Q9H2U1 1008 aaKnown RBP5.82□□□□□ -1.48
VPS41-205ENST00000414632 AAASQ9NRG9 546 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 TMEM39AQ9NV64 488 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 PI4KBQ9UBF8 816 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 STAP2Q9UGK3 403 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 GPN3Q9UHW5 284 aaPredicted RBP5.82□□□□□ -1.48
VPS41-205ENST00000414632 DACH1Q9UI36 760 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 HERC5Q9UII4 1024 aaKnown RBP5.82□□□□□ -1.48
VPS41-205ENST00000414632 PHF24Q9UPV7 400 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 PARP14Q460N5 1801 aa5.82□□□□□ -1.48
VPS41-205ENST00000414632 GREB1LQ9C091 1923 aaPredicted RBP5.82□□□□□ -1.48
VPS41-205ENST00000414632 COL11A1P12107 1806 aaPredicted RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 A0A0D9SFI3 127 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 GSG1L2A8MUP6 293 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 BTBD19C9JJ37 291 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 MPHOSPH10O00566 681 aaKnown RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 TLR3O15455 904 aaKnown RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 KLF4O43474 513 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 CTNND1O60716 968 aaKnown RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 GH2P01242 217 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 GHRHP01286 108 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 APPP05067 770 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 SHMT1P34896 483 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 CAP2P40123 477 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 PPP2R3AQ06190 1150 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 PPATQ06203 517 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 TBC1D8BQ0IIM8 1120 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 NMIQ13287 307 aaPredicted RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 CRHR2Q13324 411 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 SNAPC2Q13487 334 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 RAB3GAP1Q15042 981 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 ZYXQ15942 572 aaKnown RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 PCSK7Q16549 785 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 ZMYM1Q5SVZ6 1142 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 VPS53Q5VIR6 699 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 BNC2Q6ZN30 1099 aaPredicted RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 TTC6Q86TZ1 520 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 CERS3Q8IU89 383 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 CLEC10AQ8IUN9 316 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 SLITRK4Q8IW52 837 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 EVI5LQ96CN4 794 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 FAM227BQ96M60 508 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 STRBPQ96SI9 672 aaKnown RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 SRRTQ9BXP5 876 aaKnown RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 MUC3BQ9H195 1237 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 RBSNQ9H1K0 784 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 EPB41L4AQ9HCS5 686 aaPredicted RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 DNAJB12Q9NXW2 375 aaKnown RBP5.81□□□□□ -1.48
VPS41-205ENST00000414632 SERPINB13Q9UIV8 391 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 ZBTB21Q9ULJ3 1066 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms