RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 DNM3Q9UQ16 869 aa19.83■□□□□ 0.77
CHTOP-205ENST00000403433 SIK3Q9Y2K2 1263 aa19.83■□□□□ 0.77
CHTOP-205ENST00000403433 COL4A3BPQ9Y5P4 624 aa19.83■□□□□ 0.77
CHTOP-205ENST00000403433 TRAF5O00463 557 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 MSH4O15457 936 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 ABL1P00519 1130 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 CCDC40Q4G0X9 1142 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 TEX35Q5T0J7 233 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 KIAA1328Q86T90 577 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 CHURC1Q8WUH1 139 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 CEP63Q96MT8 703 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 NHEJ1Q9H9Q4 299 aaPredicted RBP19.82■□□□□ 0.76
CHTOP-205ENST00000403433 PCDHA2Q9Y5H9 948 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 FRMD3A2A2Y4 597 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 TBC1D12O60347 775 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 HERVK_113P62684 666 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 CDK17Q00537 523 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
CHTOP-205ENST00000403433 CCDC174Q6PII3 467 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 CEP112Q8N8E3 955 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 AGBL3Q8NEM8 1001 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 TANGO6Q9C0B7 1094 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 TMEM39BQ9GZU3 492 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 ZHX3Q9H4I2 956 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 VAV3Q9UKW4 847 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 ZNRF3Q9ULT6 936 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 GUCA1BQ9UMX6 200 aa19.82■□□□□ 0.76
CHTOP-205ENST00000403433 GNA14O95837 355 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 CLCN6P51797 869 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 RAD51AP2Q09MP3 1159 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 RSRC2Q7L4I2 434 aaKnown RBP19.81■□□□□ 0.76
CHTOP-205ENST00000403433 FAM83AQ86UY5 434 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 NELFCDQ8IXH7 590 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 GPR161Q8N6U8 529 aaKnown RBP19.81■□□□□ 0.76
CHTOP-205ENST00000403433 MTMR14Q8NCE2 650 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 FGFBP2Q9BYJ0 223 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 RANBP17Q9H2T7 1088 aaKnown RBP19.81■□□□□ 0.76
CHTOP-205ENST00000403433 VCPKMTQ9H867 229 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 MMRN2Q9H8L6 949 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 EHMT1Q9H9B1 1298 aa19.81■□□□□ 0.76
CHTOP-205ENST00000403433 FAM207AQ9NSI2 230 aaPredicted RBP19.81■□□□□ 0.76
CHTOP-205ENST00000403433 EIF3CLB5ME19 914 aaKnown RBP19.8■□□□□ 0.76
CHTOP-205ENST00000403433 GCOM1H8Y6P7 765 aaPredicted RBP19.8■□□□□ 0.76
CHTOP-205ENST00000403433 MEIS1O00470 390 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 CFBP00751 764 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 POLR2MP0CAP2 368 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 SPATA31C1P0DKV0 1188 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.764e-7■■□□□ 12.7
CHTOP-205ENST00000403433 ARSHQ5FYA8 562 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 CCDC122Q5T0U0 273 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 ZNF662Q6ZS27 426 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 SRGAP1Q7Z6B7 1085 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 FAM160B2Q86V87 743 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 SYT2Q8N9I0 419 aaPredicted RBP19.8■□□□□ 0.76
CHTOP-205ENST00000403433 EHBP1Q8NDI1 1231 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 RABGGTAQ92696 567 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 EIF3CQ99613 913 aaKnown RBP19.8■□□□□ 0.76
CHTOP-205ENST00000403433 TRIM10Q9UDY6 481 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 SMCHD1A6NHR9 2005 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 KCNA3P22001 575 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 CHMP4BP1P59074 171 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 ZYXQ15942 572 aaKnown RBP19.8■□□□□ 0.76
CHTOP-205ENST00000403433 POTEAQ6S8J7 498 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 SCFD1Q8WVM8 642 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 JAKMIP2Q96AA8 810 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 EMILIN3Q9NT22 766 aa19.8■□□□□ 0.76
CHTOP-205ENST00000403433 MRPL11Q9Y3B7 192 aaKnown RBP19.8■□□□□ 0.76
CHTOP-205ENST00000403433 HNRNPH3P31942 346 aaKnown RBP19.79■□□□□ 0.76
CHTOP-205ENST00000403433 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
CHTOP-205ENST00000403433 MIGA2Q7L4E1 593 aa19.79■□□□□ 0.76
CHTOP-205ENST00000403433 POLR3CQ9BUI4 534 aaPredicted RBP19.79■□□□□ 0.76
CHTOP-205ENST00000403433 KRT86O43790 486 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 PLA2G6O60733 806 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 CAP2P40123 477 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 PSMC6P62333 389 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 SF3B2Q13435 895 aaKnown RBP19.78■□□□□ 0.76
CHTOP-205ENST00000403433 GIT2Q14161 759 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 CDAN1Q8IWY9 1227 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 NEK11Q8NG66 645 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 CYP2W1Q8TAV3 490 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 CCDC42Q96M95 316 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 KCTD10Q9H3F6 313 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 ZNF446Q9NWS9 450 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 PLAGL2Q9UPG8 496 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 ATAD5Q96QE3 1844 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 IGLV3-22A0A075B6J6 115 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 EPHB6O15197 1021 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 ERCC3P19447 782 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 BAG6P46379 1132 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 CYP4A11Q02928 519 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 SPA17Q15506 151 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 WHAMMP3Q1A5X7 153 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 TMCO3Q6UWJ1 677 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 EIF2AK1Q9BQI3 630 aaKnown RBP19.78■□□□□ 0.76
CHTOP-205ENST00000403433 REEP2Q9BRK0 252 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.78■□□□□ 0.76
CHTOP-205ENST00000403433 RGS17Q9UGC6 210 aaPredicted RBP19.78■□□□□ 0.76
CHTOP-205ENST00000403433 PUF60Q9UHX1 559 aaKnown RBP19.78■□□□□ 0.76
CHTOP-205ENST00000403433 FEM1BQ9UK73 627 aa19.78■□□□□ 0.76
CHTOP-205ENST00000403433 EDRF1Q3B7T1 1238 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms