RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 PKP1Q13835 747 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 IDI1Q13907 227 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 C10orf62Q5T681 223 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 KRT27Q7Z3Y8 459 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 DNAJB7Q7Z6W7 309 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 PARD3BQ8TEW8 1205 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 PLB1Q6P1J6 1458 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 SSU72P8A0A1W2PR75 194 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 PDE6AP16499 860 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 METAP2P50579 478 aaKnown RBP eCLIP2.74□□□□□ -1.97
NEB-203ENST00000397345 KCNH2Q12809 1159 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 SLC9A5Q14940 896 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 PPP4R1Q8TF05 950 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 CCDC127Q96BQ5 260 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 MAGEB5Q9BZ81 275 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 NSMCE4AQ9NXX6 385 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 KATNA1O75449 491 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 SERPINB2P05120 415 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ZSCAN22P10073 491 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 HARSP12081 509 aaKnown RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 TRIM72Q6ZMU5 477 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ZBTB38Q8NAP3 1195 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 CLMNQ96JQ2 1002 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.74□□□□□ -1.97
NEB-203ENST00000397345 SPATA31E1Q6ZUB1 1445 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 CUTAO60888 179 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 OXCT1P55809 520 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ZBTB16Q05516 673 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 EPS8Q12929 822 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 CUL3Q13618 768 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 CUX1P39880 1505 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 TRIM43BA6NCK2 446 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 GOLGA8AA7E2F4 631 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 H0YJX3 145 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 KIF23Q02241 960 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 FYB2Q5VWT5 728 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 LRRC8CQ8TDW0 803 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 CCDC126Q96EE4 140 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 IL1RAPL2Q9NP60 686 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 USP40Q9NVE5 1235 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 GGT7Q9UJ14 662 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ZNF75DP51815 510 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 USP14P54578 494 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 MTERF2Q49AM1 385 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ZC3H12AQ5D1E8 599 aaKnown RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 HECTD3Q5T447 861 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 KRT35Q92764 455 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 BORCS6Q96GS4 357 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 GCOM2Q9BZD3 368 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 LZTFL1Q9NQ48 299 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 JADE2Q9NQC1 790 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 SRPRBQ9Y5M8 271 aaKnown RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 SH3TC1Q8TE82 1336 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 CASQ2O14958 399 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 PSMD3O43242 534 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 PAPOLAP51003 745 aaKnown RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 TFCP2L1Q9NZI6 479 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 A0A087WWV3 80 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 PALM3A6NDB9 673 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 KRT7P08729 469 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 SKIP12755 728 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 AADATQ8N5Z0 425 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 C17orf50Q8WW18 174 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 AGAP3Q96P47 875 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 CABP1Q9NZU7 370 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ATP8A1Q9Y2Q0 1164 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 GRIN3BO60391 1043 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 TRMT2AQ8IZ69 625 aaKnown RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 TNIP2Q8NFZ5 429 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 RBM46Q8TBY0 533 aaKnown RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 VCPKMTQ9H867 229 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 PARVBQ9HBI1 364 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 IFNKQ9P0W0 207 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 LINC00854A0A1B0GVQ3 168 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ATP5JP18859 108 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 YY1P25490 414 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 GTF2H1P32780 548 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 PPP1R18Q6NYC8 613 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 SLC7A5P1Q8MH63 180 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 MRPS27Q92552 414 aaKnown RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 SYN2Q92777 582 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 CNNM1Q9NRU3 951 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.74□□□□□ -1.97
NEB-203ENST00000397345 SEPT3Q9UH03 358 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 FBXO40Q9UH90 709 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 TLK1Q9UKI8 766 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 KNTC1P50748 2209 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 KLHL33A6NCF5 533 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 SPTLC2O15270 562 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 PARNO95453 639 aaKnown RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 ANKRD7Q92527 254 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 TMEM237Q96Q45 408 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 KATNAL1Q9BW62 490 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 MAPKBP1O60336 1514 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 KDM2BQ8NHM5 1336 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ANP32DO95626 131 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 TOGARAM2Q6ZUX3 1019 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 REM2Q8IYK8 340 aaPredicted RBP2.74□□□□□ -1.97
NEB-203ENST00000397345 NLGN1Q8N2Q7 840 aa2.74□□□□□ -1.97
NEB-203ENST00000397345 ZC3H12CQ9C0D7 883 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms