RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 AVPP01185 164 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 MYL3P08590 195 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 MRPL12P52815 198 aaKnown RBP9.36□□□□□ -0.91
CASP4-201ENST00000393150 SLFN5Q08AF3 891 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 CLN3Q13286 438 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 TKFCQ3LXA3 575 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 KIAA1211Q6ZU35 1233 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 SUGP1Q8IWZ8 645 aaKnown RBP9.36□□□□□ -0.91
CASP4-201ENST00000393150 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 SDR42E1Q8WUS8 393 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 DYNLL2Q96FJ2 89 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 RAD9AQ99638 391 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 HINFPQ9BQA5 517 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 RIOK1Q9BRS2 568 aaKnown RBP9.36□□□□□ -0.91
CASP4-201ENST00000393150 ESYT1Q9BSJ8 1104 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 MTG1Q9BT17 334 aaPredicted RBP9.36□□□□□ -0.91
CASP4-201ENST00000393150 RAVER2Q9HCJ3 691 aaKnown RBP9.36□□□□□ -0.91
CASP4-201ENST00000393150 HOMER2Q9NSB8 354 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 ADD3Q9UEY8 706 aaKnown RBP9.36□□□□□ -0.91
CASP4-201ENST00000393150 MTUS1Q9ULD2 1270 aa9.36□□□□□ -0.91
CASP4-201ENST00000393150 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.35□□□□□ -0.91
CASP4-201ENST00000393150 F5H6K3 240 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 IQCF3P0C7M6 154 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 CYP2C9P11712 490 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 PDE6AP16499 860 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 SMTNP53814 917 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 PSMC6P62333 389 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 RELBQ01201 579 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 KLRC3Q07444 240 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 TIGD5Q53EQ6 642 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 HSP90AB4PQ58FF6 505 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 TAS1R3Q7RTX0 852 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 ZNF444Q8N0Y2 327 aaPredicted RBP9.35□□□□□ -0.91
CASP4-201ENST00000393150 CHURC1Q8WUH1 139 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 PURBQ96QR8 312 aaKnown RBP9.35□□□□□ -0.91
CASP4-201ENST00000393150 VTA1Q9NP79 307 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 TRMT13Q9NUP7 481 aaKnown RBP9.35□□□□□ -0.91
CASP4-201ENST00000393150 USP3Q9Y6I4 520 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.35□□□□□ -0.91
CASP4-201ENST00000393150 LRRC37A2A6NM11 1700 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
CASP4-201ENST00000393150 EPOPA6NHQ4 379 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 A6NJY4 79 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 CAPN5O15484 640 aaPredicted RBP9.34□□□□□ -0.91
CASP4-201ENST00000393150 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 PTPN11Q06124 597 aaPredicted RBP9.34□□□□□ -0.91
CASP4-201ENST00000393150 IKBKEQ14164 716 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 ZSCAN25Q6NSZ9 544 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 NFRKBQ6P4R8 1299 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 C16orf86Q6ZW13 317 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 AACSQ86V21 672 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 CLEC10AQ8IUN9 316 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 SIAH1Q8IUQ4 282 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 ZNF295-AS1Q8N0V1 137 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 REPS2Q8NFH8 660 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 CAGE1Q8TC20 777 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 GDPD5Q8WTR4 605 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 SAMD11Q96NU1 681 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 TSPAN10Q9H1Z9 355 aaPredicted RBP9.34□□□□□ -0.91
CASP4-201ENST00000393150 ZNF395Q9H8N7 513 aaPredicted RBP9.34□□□□□ -0.91
CASP4-201ENST00000393150 SLC38A10Q9HBR0 1119 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 CD320Q9NPF0 282 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 SCHIP1Q9P0W5 487 aaPredicted RBP9.34□□□□□ -0.91
CASP4-201ENST00000393150 NYAP2Q9P242 653 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 DBNLQ9UJU6 430 aaKnown RBP9.34□□□□□ -0.91
CASP4-201ENST00000393150 GNEQ9Y223 722 aaKnown RBP9.34□□□□□ -0.91
CASP4-201ENST00000393150 RIPK3Q9Y572 518 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 INSL6Q9Y581 213 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 ZNF532Q9HCE3 1301 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 CHD7Q9P2D1 2997 aa9.34□□□□□ -0.91
CASP4-201ENST00000393150 PTPRZ1P23471 2315 aaPredicted RBP9.33□□□□□ -0.92
CASP4-201ENST00000393150 BRWD1Q9NSI6 2320 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.33□□□□□ -0.92
CASP4-201ENST00000393150 ABHD14A-ACY1A0A1B0GW23 586 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 NKRFO15226 690 aaKnown RBP eCLIP9.33□□□□□ -0.92
CASP4-201ENST00000393150 CYP2D6P10635 497 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 IL9P15248 144 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 STAT2P52630 851 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 ERVK-21P61565 698 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 ATP8B2P98198 1209 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 C12orf60Q5U649 245 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 EEPD1Q7L9B9 569 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 FAM160B2Q86V87 743 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 ADHFE1Q8IWW8 467 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 RPAP2Q8IXW5 612 aaPredicted RBP9.33□□□□□ -0.92
CASP4-201ENST00000393150 OR6J1Q8NGC5 347 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.33□□□□□ -0.92
CASP4-201ENST00000393150 AFAP1L1Q8TED9 768 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.33□□□□□ -0.92
CASP4-201ENST00000393150 FRAT1Q92837 279 aaPredicted RBP9.33□□□□□ -0.92
CASP4-201ENST00000393150 MRPL38Q96DV4 380 aaKnown RBP9.33□□□□□ -0.92
CASP4-201ENST00000393150 TRERF1Q96PN7 1200 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 DNAJC2Q99543 621 aaKnown RBP9.33□□□□□ -0.92
CASP4-201ENST00000393150 NUP88Q99567 741 aaPredicted RBP9.33□□□□□ -0.92
CASP4-201ENST00000393150 WDR11Q9BZH6 1224 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 ANTXR1Q9H6X2 564 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 SUGCTQ9HAC7 445 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 RNF146Q9NTX7 359 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 CLIP2Q9UDT6 1046 aa9.33□□□□□ -0.92
CASP4-201ENST00000393150 ZDBF2Q9HCK1 2354 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms