RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 NBPF9Q3BBW0 867 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 NBPF12Q5TAG4 269 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 CCDC62Q6P9F0 684 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 KCNT2Q6UVM3 1135 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 TBC1D1Q86TI0 1168 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 TTC7BQ86TV6 843 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 MPP5Q8N3R9 675 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 RRP36Q96EU6 259 aaKnown RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 NUP62CLQ9H1M0 184 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 A0A1W2PPL8 197 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 TOR1BO14657 336 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 MYL4P12829 197 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 SLC16A1P53985 500 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 IKBKEQ14164 716 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 CWF19L1Q69YN2 538 aaKnown RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 SYNE3Q6ZMZ3 975 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 GALNT13Q8IUC8 556 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 PPM1MQ96MI6 270 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 PHF20Q9BVI0 1012 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 TOPORSQ9NS56 1045 aaPredicted RBP4.02□□□□□ -1.77
XRN1-202ENST00000392981 SACM1LQ9NTJ5 587 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 MKL2Q9ULH7 1088 aa4.02□□□□□ -1.77
XRN1-202ENST00000392981 WDR97A6NE52 1622 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 A0A1W2PNR3 127 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 GTPBP10A4D1E9 387 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 UPK3BL1B0FP48 263 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 UPK3BL2E5RIL1 263 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 HSPA4LO95757 839 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 PAFAH1B1P43034 410 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 CCINQ13939 588 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 TUBB8Q3ZCM7 444 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 CC2D1BQ5T0F9 858 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 RC3H1Q5TC82 1133 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 TXNDC11Q6PKC3 985 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 PPIL6Q8IXY8 311 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 TRMT44Q8IYL2 757 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 STAMQ92783 540 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 NFKBIL1Q9UBC1 381 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 RABL2AQ9UBK7 228 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 KCNH4Q9UQ05 1017 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 SNPHO15079 494 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 CILPO75339 1184 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 DNTTP04053 509 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 CPB1P15086 417 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 NME1P15531 152 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 LPOP22079 712 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 ARNTP27540 789 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 RXRBP28702 533 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 CEBPAP49715 358 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 SESN3P58005 492 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 AKAP17AQ02040 695 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 PPARDQ03181 441 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 GBX1Q14549 363 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 TMEM132BQ14DG7 1078 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 PEAR1Q5VY43 1037 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 PDXDC1Q6P996 788 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 MPNDQ8N594 471 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 C19orf47Q8N9M1 422 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 LRTOMTQ8WZ04 291 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 ZNF516Q92618 1163 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 USP13Q92995 863 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 KCTD12Q96CX2 325 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 MTFMTQ96DP5 389 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 KIF1BPQ96EK5 621 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 RMDN3Q96TC7 470 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 SLF1Q9BQI6 1058 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 RASSF4Q9H2L5 321 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 ZCCHC17Q9NP64 241 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 TBC1D23Q9NUY8 699 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 DACT1Q9NYF0 836 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 GPR34Q9UPC5 381 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 BAIAP3O94812 1187 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 CD2BP2O95400 341 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 CSTBP04080 98 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 GYS1P13807 737 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 KCNJ5P48544 419 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 AMPD2Q01433 879 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 AIMP1Q12904 312 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 SF3B3Q15393 1217 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 TBC1D10BQ4KMP7 808 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 DUSP27Q5VZP5 1158 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 NUP93Q8N1F7 819 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 PPP1R16BQ96T49 567 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 TRIM6Q9C030 488 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 ZCWPW1Q9H0M4 648 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 MS4A5Q9H3V2 200 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 RABEP2Q9H5N1 569 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 VPS28Q9UK41 221 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 FBXL5Q9UKA1 691 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 ZNF215Q9UL58 517 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 POLR3KQ9Y2Y1 108 aaPredicted RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 KCNMB2Q9Y691 235 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 SSU72P8A0A1W2PR75 194 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 TCRBV16S1A1N1A0A5B0 115 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 TBX1O43435 398 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 VAMP4O75379 141 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 PARP1P09874 1014 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 BMP2P12643 396 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 GGCXP38435 758 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 PTPN11Q06124 597 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms