RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

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Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 MEIS1O00470 390 aa28.41■■■□□ 2.14
SMARCD3-203ENST00000392811 CFBP00751 764 aa28.41■■■□□ 2.14
SMARCD3-203ENST00000392811 CAP2P40123 477 aa28.41■■■□□ 2.14
SMARCD3-203ENST00000392811 PPP2R3AQ06190 1150 aa28.41■■■□□ 2.14
SMARCD3-203ENST00000392811 HERC4Q5GLZ8 1057 aaPredicted RBP28.41■■■□□ 2.14
SMARCD3-203ENST00000392811 ZBED3Q96IU2 234 aaPredicted RBP28.41■■■□□ 2.14
SMARCD3-203ENST00000392811 PGAP2Q9UHJ9 254 aa28.41■■■□□ 2.14
SMARCD3-203ENST00000392811 SIK3Q9Y2K2 1263 aa28.41■■■□□ 2.14
SMARCD3-203ENST00000392811 KRT18P05783 430 aaKnown RBP28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 SF3B2Q13435 895 aaKnown RBP28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 SLC16A10Q8TF71 515 aa28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 PITPNM2Q9BZ72 1349 aa28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 IGLV3-22A0A075B6J6 115 aa28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 FRMD3A2A2Y4 597 aa28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 KIF4BQ2VIQ3 1234 aa28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 SLC35F6Q8N357 371 aa28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 GLIS2Q9BZE0 524 aaPredicted RBP28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 ZNHIT6Q9NWK9 470 aaKnown RBP28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 DNM3Q9UQ16 869 aa28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 STK24Q9Y6E0 443 aa28.4■■■□□ 2.14
SMARCD3-203ENST00000392811 FKBP3Q00688 224 aaKnown RBP28.39■■■□□ 2.14
SMARCD3-203ENST00000392811 NBPF9Q3BBW0 867 aa28.39■■■□□ 2.14
SMARCD3-203ENST00000392811 TEX2Q8IWB9 1127 aa28.39■■■□□ 2.14
SMARCD3-203ENST00000392811 H2AFXP16104 143 aaPredicted RBP28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 PABPC4Q13310 644 aaKnown RBP eCLIP28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 NELFCDQ8IXH7 590 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 IQCDQ96DY2 449 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 SH2D4AQ9H788 454 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 GCOM1H8Y6P7 765 aaPredicted RBP28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 TRAF5O00463 557 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 WNT10BO00744 389 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 POLR2MP0CAP2 368 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 ERCC3P19447 782 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 HERVK_113P62684 666 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 SYT2Q8N9I0 419 aaPredicted RBP28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 SCFD1Q8WVM8 642 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 MYO1AQ9UBC5 1043 aa28.38■■■□□ 2.13
SMARCD3-203ENST00000392811 PLA2G6O60733 806 aa28.37■■■□□ 2.13
SMARCD3-203ENST00000392811 CCDC84Q86UT8 332 aaPredicted RBP28.37■■■□□ 2.13
SMARCD3-203ENST00000392811 FAM160B2Q86V87 743 aa28.37■■■□□ 2.13
SMARCD3-203ENST00000392811 FEZ1Q99689 392 aa28.37■■■□□ 2.13
SMARCD3-203ENST00000392811 WDR18Q9BV38 432 aa28.37■■■□□ 2.13
SMARCD3-203ENST00000392811 ZHX3Q9H4I2 956 aa28.37■■■□□ 2.13
SMARCD3-203ENST00000392811 COL4A3BPQ9Y5P4 624 aa28.37■■■□□ 2.13
SMARCD3-203ENST00000392811 EPHB6O15197 1021 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 CYP4A11Q02928 519 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 GIT2Q14161 759 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 SAMD1Q6SPF0 538 aaPredicted RBP28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 NHEJ1Q9H9Q4 299 aaPredicted RBP28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 EMILIN3Q9NT22 766 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 FBXO28Q9NVF7 368 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 TRIM10Q9UDY6 481 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 SHTN1A0MZ66 631 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 CTAGE9A4FU28 777 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 SPDYE4A6NLX3 237 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 EML1O00423 815 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 MAP3K10Q02779 954 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 KCTD10Q9H3F6 313 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 FAM207AQ9NSI2 230 aaPredicted RBP28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 PIM2Q9P1W9 311 aa28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 MRPL11Q9Y3B7 192 aaKnown RBP28.36■■■□□ 2.13
SMARCD3-203ENST00000392811 CYLC1P35663 651 aaPredicted RBP28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 CEP63Q96MT8 703 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 EIF2AK1Q9BQI3 630 aaKnown RBP28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 POLR3CQ9BUI4 534 aaPredicted RBP28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 MMRN2Q9H8L6 949 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 FEM1BQ9UK73 627 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 KIF20AO95235 890 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 CDK17Q00537 523 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 CIAPIN1Q6FI81 312 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 CCDC170Q8IYT3 715 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 REEP2Q9BRK0 252 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 MYOZ2Q9NPC6 264 aa28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 SCAF8Q9UPN6 1271 aaKnown RBP28.35■■■□□ 2.13
SMARCD3-203ENST00000392811 ASNSP08243 561 aa28.34■■■□□ 2.13
SMARCD3-203ENST00000392811 KRT83P78385 493 aa28.34■■■□□ 2.13
SMARCD3-203ENST00000392811 CCDC40Q4G0X9 1142 aa28.34■■■□□ 2.13
SMARCD3-203ENST00000392811 NAPGQ99747 312 aaPredicted RBP28.34■■■□□ 2.13
SMARCD3-203ENST00000392811 HAUS4Q9H6D7 363 aa28.34■■■□□ 2.13
SMARCD3-203ENST00000392811 CDC23Q9UJX2 597 aa28.34■■■□□ 2.13
SMARCD3-203ENST00000392811 GUCA1BQ9UMX6 200 aa28.34■■■□□ 2.13
SMARCD3-203ENST00000392811 UBXN2AP68543 259 aa28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 RSRC2Q7L4I2 434 aaKnown RBP28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 TANGO6Q9C0B7 1094 aa28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 RGL1Q9NZL6 768 aa28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 DDX41Q9UJV9 622 aaKnown RBP28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 EIF3CLB5ME19 914 aaKnown RBP28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 HNRNPH3P31942 346 aaKnown RBP28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 CBX1P83916 185 aa28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 SLC30A10Q6XR72 485 aa28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 LDHDQ86WU2 507 aa28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 EIF3CQ99613 913 aaKnown RBP28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 TFR2Q9UP52 801 aa28.33■■■□□ 2.13
SMARCD3-203ENST00000392811 CASP5P51878 434 aa28.32■■■□□ 2.12
SMARCD3-203ENST00000392811 OTOP1Q7RTM1 612 aa28.32■■■□□ 2.12
SMARCD3-203ENST00000392811 CCDC155Q8N6L0 562 aa28.32■■■□□ 2.12
SMARCD3-203ENST00000392811 BHMT2Q9H2M3 363 aa28.32■■■□□ 2.12
SMARCD3-203ENST00000392811 PLAGL2Q9UPG8 496 aa28.32■■■□□ 2.12
SMARCD3-203ENST00000392811 LRCH2Q5VUJ6 765 aa28.31■■■□□ 2.12
SMARCD3-203ENST00000392811 SFR1Q86XK3 245 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms