RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DIS3Q9Y2L1 958 aaKnown RBP-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 NFS1Q9Y697 457 aa-0.05□□□□□ -2.42
TRAJ28-201ENST00000390509 ATAD2Q6PL18 1390 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SYNE1Q8NF91 8797 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 NOTCH4Q99466 2003 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PRR36Q9H6K5 1346 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 IGKV6-21A0A0C4DH24 114 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 FAM221BA6H8Z2 402 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 MANSC4A6NHS7 340 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 A6NJR5 290 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 METTL12A8MUP2 240 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PHGR1C9JFL3 82 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SOCS2O14508 198 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 LZTS3O60299 673 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 FAM20BO75063 409 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 FKTNO75072 461 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ESRRBO95718 433 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 TOP3BO95985 862 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PRKCGP05129 697 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 RPLP1P05386 114 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CD1AP06126 327 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SYPP08247 313 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 RNF224P0DH78 156 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 GLI4P10075 376 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 GYPEP15421 78 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ITPKBP27987 946 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CSF2RBP32927 897 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 MMP13P45452 471 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CACNA2D1P54289 1103 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CORO7P57737 925 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 KRTAP12-4P60329 112 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ERVK11-1P61568 191 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 RPL36AP83881 106 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SMAD3P84022 425 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 RBM10P98175 930 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 IRF9Q00978 393 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 FOXL1Q12952 345 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 MPP3Q13368 585 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ADAM9Q13443 819 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PMS2P11Q13670 270 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SLBPQ14493 270 aaKnown RBP eCLIP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 USP10Q14694 798 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF169Q14929 603 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 FCN2Q15485 313 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 TCEA2Q15560 299 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 AMHR2Q16671 573 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 BBS9Q3SYG4 887 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF672Q499Z4 452 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF585BQ52M93 769 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 RABL3Q5HYI8 236 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 RPS26P11Q5JNZ5 115 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PPM1JQ5JR12 505 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PRAMEF13Q5VWM6 474 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 HLA-DQA1Q5Y7H0 255 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF772Q68DY9 489 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 DMKNQ6E0U4 476 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SPINK14Q6IE38 97 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PLEKHA7Q6IQ23 1121 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ADAM5Q6NVV9 412 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CCDC62Q6P9F0 684 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 TRMT10BQ6PF06 316 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 IGFL3Q6UXB1 125 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CD300LDQ6UXZ3 194 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 Q6ZRM9 215 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 Q6ZUG5 572 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 DGLUCYQ7Z3D6 616 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF438Q7Z4V0 828 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 BRAPQ7Z569 592 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 NEK8Q86SG6 692 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CDH24Q86UP0 819 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 JAMLQ86YT9 394 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 AEBP1Q8IUX7 1158 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 P3H3Q8IVL6 736 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CMTR2Q8IYT2 770 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 NETO2Q8NC67 525 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 TSEN2Q8NCE0 465 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 LINC00116Q8NCU8 138 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 KREMEN2Q8NCW0 462 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 NUDT10Q8NFP7 164 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 RIN3Q8TB24 985 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ENOX1Q8TC92 643 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SYTL5Q8TDW5 730 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SCG3Q8WXD2 468 aaKnown RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CASKIN2Q8WXE0 1202 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 KCNB2Q92953 911 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 VTI1AQ96AJ9 217 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 NUDT11Q96G61 164 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 AJUBAQ96IF1 538 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CYYR1Q96J86 154 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 GJD4Q96KN9 370 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 LMLNQ96KR4 655 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 SLITRK1Q96PX8 696 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 JMJD8Q96S16 334 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 MPHOSPH9Q99550 1183 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 MEIS3Q99687 375 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 CHRDL1Q9BU40 450 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 ASPNQ9BXN1 380 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 PLA2G12AQ9BZM1 189 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 FOXP3Q9BZS1 431 aa-0.06□□□□□ -2.42
TRAJ28-201ENST00000390509 KIAA1683Q9H0B3 1180 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms