RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 FXR1P51114 621 aaKnown RBP eCLIP11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 HIRAP54198 1017 aaPredicted RBP11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 TNFAIP1Q13829 316 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 TSR1Q2NL82 804 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 FIGNQ5HY92 759 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 FKBP15Q5T1M5 1219 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 TOGARAM2Q6ZUX3 1019 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 DYMQ7RTS9 669 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 CREBRFQ8IUR6 639 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 CPLX3Q8WVH0 158 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 DNAJC19Q96DA6 116 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 ERGIC2Q96RQ1 377 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 ZNF408Q9H9D4 720 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 SLC39A2Q9NP94 309 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 GPRC5DQ9NZD1 345 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 DNAI1Q9UI46 699 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 CAPN11Q9UMQ6 739 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 MRPL11Q9Y3B7 192 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 RABGAP1Q9Y3P9 1069 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 ADGRG1Q9Y653 693 aa11.65□□□□□ -0.54
POLR2J3-201ENST00000379340 SOWAHDA6NJG2 315 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 CA12O43570 354 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 PLA2G4BP0C869 781 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 IDEP14735 1019 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 KRT9P35527 623 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 CXCL9Q07325 125 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 COASYQ13057 564 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 PRR16Q569H4 304 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 FAM26FQ5R3K3 315 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 FAM83BQ5T0W9 1011 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 KCNK18Q7Z418 384 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 MYOCDQ8IZQ8 938 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 ZNF710Q8N1W2 664 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 OR8K1Q8NGG5 319 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 SEMA6BQ9H3T3 888 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 PANK4Q9NVE7 773 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 PGAP2Q9UHJ9 254 aa11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 LUC7L2Q9Y383 392 aaKnown RBP11.64□□□□□ -0.55
POLR2J3-201ENST00000379340 A0A1W2PQJ5 194 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 GCOM1H8Y6P7 765 aaPredicted RBP11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 OPLAHO14841 1288 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 POLR2MP0CAP2 368 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 MUTP22033 750 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 RPA1P27694 616 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 CASQ1P31415 396 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 ZNF76P36508 570 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 SPIRE1Q08AE8 756 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 NCBP1Q09161 790 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 ECM1Q16610 540 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 MAN2A1Q16706 1144 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 RAD9BQ6WBX8 426 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 TRPM4Q8TD43 1214 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 LENG9Q96B70 501 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 MYOZ2Q9NPC6 264 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 ADARB2Q9NS39 739 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 MYO1AQ9UBC5 1043 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 PNMA2Q9UL42 364 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 KIAA1024Q9UPX6 916 aa11.63□□□□□ -0.55
POLR2J3-201ENST00000379340 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 FRMD3A2A2Y4 597 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 PES1O00541 588 aaKnown RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 WNT10BO00744 389 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 GNA14O95837 355 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 GMPSP49915 693 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 ZNF280AP59817 542 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 SNAP25P60880 206 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 GNG11P61952 73 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 TBC1D8BQ0IIM8 1120 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 GPBP1Q86WP2 473 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 SPICE1Q8N0Z3 855 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 CEP63Q96MT8 703 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 TTYH3Q9C0H2 523 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 TMEM39BQ9GZU3 492 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 DNM3Q9UQ16 869 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 LOXHD1Q8IVV2 1947 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 TTC26A0AVF1 554 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 B4DLN1 442 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 E9PMD0 336 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 FAM86B1E9PN63 330 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 MSH4O15457 936 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 KIF5CO60282 957 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 MED24O75448 989 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 FAM86B2P0C5J1 330 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 CYP11B2P19099 503 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 SLC12A3P55017 1021 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 ZBED6P86452 979 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 CDK17Q00537 523 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 FKBP3Q00688 224 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms