RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 MOXD1Q6UVY6 613 aa14.98□□□□□ -0.01
UBA3-201ENST00000349511 SMYD4Q8IYR2 804 aaPredicted RBP14.98□□□□□ -0.01
UBA3-201ENST00000349511 CALML4Q96GE6 196 aa14.98□□□□□ -0.01
UBA3-201ENST00000349511 CCDC34Q96HJ3 373 aa14.98□□□□□ -0.01
UBA3-201ENST00000349511 CDK5RAP3Q96JB5 506 aa14.98□□□□□ -0.01
UBA3-201ENST00000349511 PNMA5Q96PV4 448 aa14.98□□□□□ -0.01
UBA3-201ENST00000349511 TEX13BQ9BXU2 312 aa14.98□□□□□ -0.01
UBA3-201ENST00000349511 CXCL11O14625 94 aa14.97□□□□□ -0.01
UBA3-201ENST00000349511 CHMP2AO43633 222 aa14.97□□□□□ -0.01
UBA3-201ENST00000349511 MYCLP12524 364 aaPredicted RBP14.97□□□□□ -0.01
UBA3-201ENST00000349511 TMEM139Q8IV31 216 aa14.97□□□□□ -0.01
UBA3-201ENST00000349511 RMDN3Q96TC7 470 aa14.97□□□□□ -0.01
UBA3-201ENST00000349511 ASCC2Q9H1I8 757 aaPredicted RBP14.97□□□□□ -0.01
UBA3-201ENST00000349511 R3HDMLQ9H3Y0 253 aa14.97□□□□□ -0.01
UBA3-201ENST00000349511 GABPB1Q06547 395 aaPredicted RBP14.96□□□□□ -0.01
UBA3-201ENST00000349511 TBX2Q13207 712 aaPredicted RBP14.96□□□□□ -0.01
UBA3-201ENST00000349511 CEP55Q53EZ4 464 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 NT5DC1Q5TFE4 455 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 KCNK18Q7Z418 384 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 SLFN12Q8IYM2 578 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 KRT222Q8N1A0 295 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 PROCA1Q8NCQ7 364 aaPredicted RBP14.96□□□□□ -0.01
UBA3-201ENST00000349511 WDR11Q9BZH6 1224 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 EHMT1Q9H9B1 1298 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 KCNH4Q9UQ05 1017 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 DDX39AO00148 427 aaKnown RBP14.96□□□□□ -0.01
UBA3-201ENST00000349511 H2AFXP16104 143 aaPredicted RBP14.96□□□□□ -0.01
UBA3-201ENST00000349511 ITGB5P18084 799 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 CCT6AP40227 531 aaKnown RBP14.96□□□□□ -0.01
UBA3-201ENST00000349511 MOGSQ13724 837 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 LBX2Q6XYB7 198 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 SPATA20Q8TB22 786 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 PYM1Q9BRP8 204 aaKnown RBP14.96□□□□□ -0.01
UBA3-201ENST00000349511 GBA2Q9HCG7 927 aaPredicted RBP14.96□□□□□ -0.01
UBA3-201ENST00000349511 ZNF446Q9NWS9 450 aa14.96□□□□□ -0.01
UBA3-201ENST00000349511 POTEB3A0JP26 581 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 FANCGO15287 622 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 KIF20AO95235 890 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 MRPS9P82933 396 aaKnown RBP14.95□□□□□ -0.02
UBA3-201ENST00000349511 SPIRE1Q08AE8 756 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 MORC3Q14149 939 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 MCM6Q14566 821 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 ARHGEF16Q5VV41 709 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 POTEBQ6S5H4 581 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 MLKLQ8NB16 471 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 DACH1Q9UI36 760 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 NFE2L3Q9Y4A8 694 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 ARHGAP6O43182 974 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 ZSCAN12O43309 604 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 COBLO75128 1261 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 MED24O75448 989 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 ZNF18P17022 549 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 CDK11BP21127 795 aaKnown RBP14.95□□□□□ -0.02
UBA3-201ENST00000349511 HOXA7P31268 230 aaPredicted RBP14.95□□□□□ -0.02
UBA3-201ENST00000349511 OAZ1P54368 228 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 HERVK_113P62684 666 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 CYP4A11Q02928 519 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 PGM5Q15124 567 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 KLHL10Q6JEL2 608 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 TRMT44Q8IYL2 757 aaKnown RBP14.95□□□□□ -0.02
UBA3-201ENST00000349511 ENOX1Q8TC92 643 aaKnown RBP14.95□□□□□ -0.02
UBA3-201ENST00000349511 ZNF577Q9BSK1 485 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 ACAD9Q9H845 621 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 A1CFQ9NQ94 594 aaKnown RBP14.95□□□□□ -0.02
UBA3-201ENST00000349511 BLOC1S4Q9NUP1 217 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 KBTBD4Q9NVX7 518 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 AGTPBP1Q9UPW5 1226 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 KIAA1024Q9UPX6 916 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 PPP2R2CQ9Y2T4 447 aa14.95□□□□□ -0.02
UBA3-201ENST00000349511 E9PMD0 336 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 EML1O00423 815 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 MEIS1O00470 390 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 GTPBP6O43824 516 aaPredicted RBP14.94□□□□□ -0.02
UBA3-201ENST00000349511 CYP2C8P10632 490 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 LRCH2Q5VUJ6 765 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 GPAT2Q6NUI2 795 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 NCAPG2Q86XI2 1143 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 BAG1Q99933 345 aaPredicted RBP14.94□□□□□ -0.02
UBA3-201ENST00000349511 MXRA8Q9BRK3 442 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 TXNRD2Q9NNW7 524 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 PXMP2Q9NR77 195 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 MAPK8IP1Q9UQF2 711 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 CENPFP49454 3210 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 RPTORQ8N122 1335 aa14.94□□□□□ -0.02
UBA3-201ENST00000349511 POTEFA5A3E0 1075 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 ATP2A1O14983 1001 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 TBX3O15119 743 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 URI1O94763 535 aaPredicted RBP14.93□□□□□ -0.02
UBA3-201ENST00000349511 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
UBA3-201ENST00000349511 SSBP05455 408 aaKnown RBP eCLIP14.93□□□□□ -0.02
UBA3-201ENST00000349511 SNAPC2Q13487 334 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 Q3C1V9 767 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 ARHGAP29Q52LW3 1261 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 POTEGQ6S5H5 508 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 DYMQ7RTS9 669 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 C2orf69Q8N8R5 385 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 TRIML1Q8N9V2 468 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 LARP4BQ92615 738 aaKnown RBP14.93□□□□□ -0.02
UBA3-201ENST00000349511 FAM20AQ96MK3 541 aa14.93□□□□□ -0.02
UBA3-201ENST00000349511 MED15Q96RN5 788 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms