RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 FAM83AQ86UY5 434 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 FBXO28Q9NVF7 368 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 ENC1O14682 589 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 AMPD2Q01433 879 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 RASSF7Q02833 373 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 PDE4CQ08493 712 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 RASA3Q14644 834 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 TCP11X2Q5H9J9 407 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 MTFR1LQ9H019 292 aa23.64■■□□□ 1.37
PTPN18-202ENST00000347849 RNF216Q9NWF9 866 aaPredicted RBP23.64■■□□□ 1.37
PTPN18-202ENST00000347849 EPN1Q9Y6I3 576 aaPredicted RBP23.64■■□□□ 1.37
PTPN18-202ENST00000347849 KCNJ18B7U540 433 aa23.63■■□□□ 1.37
PTPN18-202ENST00000347849 MARCH6O60337 910 aa23.63■■□□□ 1.37
PTPN18-202ENST00000347849 UBXN1Q04323 297 aa23.63■■□□□ 1.37
PTPN18-202ENST00000347849 KCNJ12Q14500 433 aa23.63■■□□□ 1.37
PTPN18-202ENST00000347849 CCDC174Q6PII3 467 aa23.63■■□□□ 1.37
PTPN18-202ENST00000347849 CYP2W1Q8TAV3 490 aa23.63■■□□□ 1.37
PTPN18-202ENST00000347849 LARP4BQ92615 738 aaKnown RBP23.63■■□□□ 1.37
PTPN18-202ENST00000347849 MAGEF1Q9HAY2 307 aa23.63■■□□□ 1.37
PTPN18-202ENST00000347849 KCNMB3Q9NPA1 279 aa23.63■■□□□ 1.37
PTPN18-202ENST00000347849 FAM86B1E9PN63 330 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 FAM86B2P0C5J1 330 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 POLD1P28340 1107 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 TNNT3P45378 269 aaPredicted RBP23.62■■□□□ 1.37
PTPN18-202ENST00000347849 KRT79Q5XKE5 535 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 SV2BQ7L1I2 683 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 KIAA0895Q8NCT3 520 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 ANKRD20A12PQ8NF67 263 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 FAM71BQ8TC56 605 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 TBC1D12O60347 775 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 IVLP07476 585 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 GCFC2P16383 781 aaKnown RBP23.62■■□□□ 1.37
PTPN18-202ENST00000347849 DGKZQ13574 1117 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 PRR16Q569H4 304 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 SAMD7Q7Z3H4 446 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 CDK5RAP3Q96JB5 506 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 HDAC6Q9UBN7 1215 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 RSPH14Q9UHP6 348 aa23.62■■□□□ 1.37
PTPN18-202ENST00000347849 TUBBP07437 444 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 USP11P51784 963 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 TMEM119Q4V9L6 283 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 RAD54LQ92698 747 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 LENG9Q96B70 501 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 RAB34Q9BZG1 259 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 SLC39A2Q9NP94 309 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 EXOC1Q9NV70 894 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 REXO2Q9Y3B8 237 aaKnown RBP23.61■■□□□ 1.37
PTPN18-202ENST00000347849 NKRFO15226 690 aaKnown RBP eCLIP23.61■■□□□ 1.372e-7■□□□□ 9.5
PTPN18-202ENST00000347849 NDUFA10O95299 355 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 MMP14P50281 582 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 TTI2Q6NXR4 508 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 DUSP9Q99956 384 aaKnown RBP23.61■■□□□ 1.37
PTPN18-202ENST00000347849 GLT8D2Q9H1C3 349 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 TFR2Q9UP52 801 aa23.61■■□□□ 1.37
PTPN18-202ENST00000347849 CYP3A7-CYP3A51PA0A087WV96 503 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 CYP3A7P24462 503 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 SPAG1Q07617 926 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 AP3B2Q13367 1082 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 WDR93Q6P2C0 686 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 SLC30A10Q6XR72 485 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 TEPSINQ96N21 525 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 MBOAT7Q96N66 472 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 VCPKMTQ9H867 229 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 GOPCQ9HD26 462 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 TRIM14Q14142 442 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 GLIS3Q8NEA6 775 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 STK17AQ9UEE5 414 aa23.6■■□□□ 1.37
PTPN18-202ENST00000347849 PHF20L1A8MW92 1017 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 ANKRD40Q6AI12 368 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 ACBD3Q9H3P7 528 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 FAM204AQ9H8W3 233 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 FER1L6Q2WGJ9 1857 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 TTC26A0AVF1 554 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 SPDYE3A6NKU9 549 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 E9PMD0 336 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 PES1O00541 588 aaKnown RBP23.59■■□□□ 1.37
PTPN18-202ENST00000347849 SRGAP2O75044 1071 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 ETNPPLQ8TBG4 499 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 SYNPO2Q9UMS6 1093 aa23.59■■□□□ 1.37
PTPN18-202ENST00000347849 POTEB3A0JP26 581 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 POTECB2RU33 542 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 H7C1D1 291 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 AMPD3Q01432 767 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 MAP3K10Q02779 954 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 TBC1D10BQ4KMP7 808 aaPredicted RBP23.58■■□□□ 1.37
PTPN18-202ENST00000347849 POTEBQ6S5H4 581 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 TRAPPC11Q7Z392 1133 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 DDX12PQ92771 950 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 TRIM47Q96LD4 638 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 PSMA7O14818 248 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 SREBF1P36956 1147 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 GMPSP49915 693 aaPredicted RBP23.58■■□□□ 1.37
PTPN18-202ENST00000347849 SPIRE1Q08AE8 756 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 MMS19Q96T76 1030 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 SGIP1Q9BQI5 828 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 MED4Q9NPJ6 270 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 KIAA1024Q9UPX6 916 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 GJA3Q9Y6H8 435 aa23.58■■□□□ 1.37
PTPN18-202ENST00000347849 CFBP00751 764 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 ZNF280AP59817 542 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms