RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 JRKLQ9Y4A0 524 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 CCHCR1Q8TD31 782 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 ZNF526Q8TF50 670 aaPredicted RBP16.48■□□□□ 0.23
COL11A2-201ENST00000341947 PPP1R16BQ96T49 567 aa16.48■□□□□ 0.23
COL11A2-201ENST00000341947 MYL1P05976 194 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 ANKRD20A4Q4UJ75 823 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 ANKRD20A8PQ5CZ79 823 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 ANKRD20A2Q5SQ80 823 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 ANKRD20A1Q5TYW2 823 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 GCNT4Q9P109 453 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 TTI1O43156 1089 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 OSTNP61366 133 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 ETF1P62495 437 aaKnown RBP16.47■□□□□ 0.23
COL11A2-201ENST00000341947 MED4Q9NPJ6 270 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 EPS15L1Q9UBC2 864 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 DAAM1Q9Y4D1 1078 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 SUN1O94901 812 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 DSTYKQ6XUX3 929 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 COA7Q96BR5 231 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 HEXIM2Q96MH2 286 aaKnown RBP16.47■□□□□ 0.23
COL11A2-201ENST00000341947 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 MKRN3Q13064 507 aaKnown RBP16.47■□□□□ 0.23
COL11A2-201ENST00000341947 SEPT2Q15019 361 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 NUDCD1Q96RS6 583 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 PARVGQ9HBI0 331 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 PNMA3Q9UL41 463 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 USP17L3A6NCW0 530 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 USP17L4A6NCW7 530 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 SPECC1L-ADORA2AF8WAN1 911 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 SH3BGRP55822 239 aaPredicted RBP16.47■□□□□ 0.23
COL11A2-201ENST00000341947 PHEXP78562 749 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 RCN2Q14257 317 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 ARL13BQ3SXY8 428 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 TMTC3Q6ZXV5 915 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
COL11A2-201ENST00000341947 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL11A2-201ENST00000341947 INTS9Q9NV88 658 aaKnown RBP16.47■□□□□ 0.23
COL11A2-201ENST00000341947 BASP1P80723 227 aaKnown RBP16.46■□□□□ 0.23
COL11A2-201ENST00000341947 ALCAMQ13740 583 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 GANCQ8TET4 914 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 EVI5O60447 810 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 HSPA8P11142 646 aaKnown RBP16.46■□□□□ 0.23
COL11A2-201ENST00000341947 CDC37Q16543 378 aaPredicted RBP16.46■□□□□ 0.23
COL11A2-201ENST00000341947 CALN1Q9BXU9 219 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 NFKBIAP25963 317 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 SOX5P35711 763 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 PDXDC2PQ6P474 469 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 LCORLQ8N3X6 602 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 SLC10A4Q96EP9 437 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 EEF2KMTQ96G04 330 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 FNDC3AQ9Y2H6 1198 aaKnown RBP16.46■□□□□ 0.23
COL11A2-201ENST00000341947 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 GFPT2O94808 682 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 CD58P19256 250 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 FKBP3Q00688 224 aaKnown RBP16.46■□□□□ 0.23
COL11A2-201ENST00000341947 TMED2Q15363 201 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL11A2-201ENST00000341947 TLR7Q9NYK1 1049 aaKnown RBP16.46■□□□□ 0.23
COL11A2-201ENST00000341947 PCDHA5Q9Y5H7 936 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 MYL3P08590 195 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 CDC25BP30305 580 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 RBL2Q08999 1139 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 STAG1Q8WVM7 1258 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 POLR3EQ9NVU0 708 aa16.46■□□□□ 0.23
COL11A2-201ENST00000341947 HOXA7P31268 230 aaPredicted RBP16.45■□□□□ 0.22
COL11A2-201ENST00000341947 DDIT3P35638 169 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 KRT33BQ14525 404 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 ZSCAN26Q16670 478 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 PGRMC1O00264 195 aaKnown RBP16.45■□□□□ 0.22
COL11A2-201ENST00000341947 CIITAP33076 1130 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 FAM133AQ8N9E0 248 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 OLA1Q9NTK5 396 aaKnown RBP16.45■□□□□ 0.22
COL11A2-201ENST00000341947 TMEM94Q12767 1356 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 MMP1P03956 469 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 NPR1P16066 1061 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 PPARGP37231 505 aaPredicted RBP16.45■□□□□ 0.22
COL11A2-201ENST00000341947 PSMD2Q13200 908 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 NDUFAF2Q8N183 169 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 ABCF3Q9NUQ8 709 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 LTKP29376 864 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 MXI1P50539 228 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 FGD4Q96M96 766 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 MSTO1Q9BUK6 570 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
COL11A2-201ENST00000341947 SPOPLQ6IQ16 392 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 SCARA5Q6ZMJ2 495 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 SLC35F6Q8N357 371 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 BCAS4Q8TDM0 211 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 MICAL1Q8TDZ2 1067 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 CFAP36Q96G28 342 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 EMILIN3Q9NT22 766 aa16.45■□□□□ 0.22
COL11A2-201ENST00000341947 C10orf76Q5T2E6 689 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 BCL2L12Q9HB09 334 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 FIS1Q9Y3D6 152 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms