RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 MB21D1Q8N884 522 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 SH2D4AQ9H788 454 aa11.29□□□□□ -0.6
RBFOX1-202ENST00000340209 GCFC2P16383 781 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 MKL1Q969V6 931 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 RABGAP1Q9Y3P9 1069 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 IGSF3O75054 1194 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 NT5C2P49902 561 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 IL31RAQ8NI17 732 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 TRPM4Q8TD43 1214 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 ATG4CQ96DT6 458 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 GMCL1Q96IK5 515 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 C7orf25Q9BPX7 421 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 EIF2AK1Q9BQI3 630 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 NT5C3AQ9H0P0 336 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 ABHD10Q9NUJ1 306 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 MRPL11Q9Y3B7 192 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 CCP110O43303 1012 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 STX10O60499 249 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 CYP2J2P51589 502 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 TNFAIP1Q13829 316 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 PPP4R3AQ6IN85 833 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 KRT26Q7Z3Y9 468 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 WNK4Q96J92 1243 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 REEP2Q9BRK0 252 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 ZNF541Q9H0D2 1346 aa11.28□□□□□ -0.6
RBFOX1-202ENST00000340209 PLEKP08567 350 aaPredicted RBP11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 MYBP10242 640 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 CASP5P51878 434 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 ERVK-24P63145 666 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 KCNA1Q09470 495 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 EEPD1Q7L9B9 569 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 APTXQ7Z2E3 356 aaKnown RBP11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 FAM114A1Q8IWE2 563 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 SLFN12Q8IYM2 578 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 SYCP3Q8IZU3 236 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 GMCL1P1Q8NEA9 526 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 DHTKD1Q96HY7 919 aaPredicted RBP11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 WDR18Q9BV38 432 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 RUSC1Q9BVN2 902 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 CUEDC2Q9H467 287 aa11.27□□□□□ -0.6
RBFOX1-202ENST00000340209 LGALS16A8MUM7 142 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 OPLAHO14841 1288 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 AKR1B10O60218 316 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 NMT1P30419 496 aaKnown RBP11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 KCNB1Q14721 858 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 ZC2HC1CQ53FD0 456 aaPredicted RBP11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 AGBL3Q8NEM8 1001 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 UBXN4Q92575 508 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 GMLQ99445 158 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 PAGR1Q9BTK6 254 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 WDR11Q9BZH6 1224 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 MTFR1LQ9H019 292 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 USO1O60763 962 aaKnown RBP11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 NR2F2P24468 414 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 NCBP1Q09161 790 aaKnown RBP11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 AP3B2Q13367 1082 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 ADAM9Q13443 819 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 RAPGEF1Q13905 1077 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 MUM1L1Q5H9M0 696 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 DNAAF5Q86Y56 855 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 ELOA2Q8IYF1 753 aaPredicted RBP11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 LIMA1Q9UHB6 759 aaKnown RBP11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 KDM3AQ9Y4C1 1321 aa11.27□□□□□ -0.61
RBFOX1-202ENST00000340209 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 REXO1L1PQ8IX06 675 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 GLT8D2Q9H1C3 349 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 SEPT11Q9NVA2 429 aaKnown RBP11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 COL4A5P29400 1685 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 CYP11B2P19099 503 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 CHMP4BP1P59074 171 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 SLC35F6Q8N357 371 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 LSM14BQ9BX40 385 aaKnown RBP11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 PLEKHA4Q9H4M7 779 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 DDNO94850 711 aaPredicted RBP11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 FOSP01100 380 aaPredicted RBP11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 FKBP1AP62942 108 aaKnown RBP11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 PDE4CQ08493 712 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 PDIA5Q14554 519 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 MIER3Q7Z3K6 550 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 TMEM139Q8IV31 216 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 ZNF397Q8NF99 534 aaPredicted RBP11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 OR8K1Q8NGG5 319 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 NDST4Q9H3R1 872 aa11.26□□□□□ -0.61
RBFOX1-202ENST00000340209 ARHGEF35A5YM69 484 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 EPHB6O15197 1021 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 EEF1GP26641 437 aaKnown RBP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 USP11P51784 963 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 TBX2Q13207 712 aaPredicted RBP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 CAGE1Q8TC20 777 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms