RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 SEC23AQ15436 765 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
CCDC87-201ENST00000333861 TBC1D5Q92609 795 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 SAAL1Q96ER3 474 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 ZHX3Q9H4I2 956 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 ACTR5Q9H9F9 607 aaPredicted RBP12.2□□□□□ -0.46
CCDC87-201ENST00000333861 TMBIM4Q9HC24 238 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 GOPCQ9HD26 462 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 ARFGEF2Q9Y6D5 1785 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 PDS5AQ29RF7 1337 aaKnown RBP12.2□□□□□ -0.46
CCDC87-201ENST00000333861 F8W031 263 aaPredicted RBP12.2□□□□□ -0.46
CCDC87-201ENST00000333861 MGRN1O60291 552 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 CEP104O60308 925 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 XBP1P17861 261 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 SLC8A1P32418 973 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 ZNF844Q08AG5 666 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 CDC37Q16543 378 aaPredicted RBP12.2□□□□□ -0.46
CCDC87-201ENST00000333861 CCDC63Q8NA47 563 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 CCT6BQ92526 530 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 PURBQ96QR8 312 aaKnown RBP12.2□□□□□ -0.46
CCDC87-201ENST00000333861 SPAG5Q96R06 1193 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 SELENOSQ9BQE4 189 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 TTYH3Q9C0H2 523 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 AGAP1Q9UPQ3 857 aa12.2□□□□□ -0.46
CCDC87-201ENST00000333861 MPHOSPH10O00566 681 aaKnown RBP12.19□□□□□ -0.46
CCDC87-201ENST00000333861 CYP19A1P11511 503 aaPredicted RBP12.19□□□□□ -0.46
CCDC87-201ENST00000333861 KLRK1P26718 216 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 TXKP42681 527 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 CTSWP56202 376 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 ZBED6P86452 979 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 PLCB4Q15147 1175 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 MEA1Q16626 185 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 GKAP1Q5VSY0 366 aaPredicted RBP12.19□□□□□ -0.46
CCDC87-201ENST00000333861 TRIM51Q9BSJ1 452 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 NACAP1Q9BZK3 213 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 BCAS3Q9H6U6 928 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC87-201ENST00000333861 USP17L3A6NCW0 530 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 USP17L4A6NCW7 530 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 DAPK3O43293 454 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 DNM2P50570 870 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 POLR2FP61218 127 aaKnown RBP12.19□□□□□ -0.46
CCDC87-201ENST00000333861 PSMD2Q13200 908 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 PRPF4BQ13523 1007 aaKnown RBP12.19□□□□□ -0.46
CCDC87-201ENST00000333861 RAPGEF1Q13905 1077 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 CFAP221Q4G0U5 840 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 DTHD1Q6ZMT9 781 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 KIF6Q6ZMV9 814 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 USP17L1Q7RTZ2 530 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 FAM133AQ8N9E0 248 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 KIAA0895Q8NCT3 520 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 TNFRSF25Q93038 417 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 TATDN2Q93075 761 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 ELAC2Q9BQ52 826 aaKnown RBP12.19□□□□□ -0.46
CCDC87-201ENST00000333861 NUDT12Q9BQG2 462 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 ISCA1Q9BUE6 129 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 GDF3Q9NR23 364 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 AMACRQ9UHK6 382 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 SLC12A6Q9UHW9 1150 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 TRIM33Q9UPN9 1127 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 ITGB4P16144 1822 aa12.19□□□□□ -0.46
CCDC87-201ENST00000333861 HMGB1P1B2RPK0 211 aaPredicted RBP12.18□□□□□ -0.46
CCDC87-201ENST00000333861 CTNND1O60716 968 aaKnown RBP12.18□□□□□ -0.46
CCDC87-201ENST00000333861 TCP1P17987 556 aaKnown RBP12.18□□□□□ -0.46
CCDC87-201ENST00000333861 CALRP27797 417 aaKnown RBP12.18□□□□□ -0.46
CCDC87-201ENST00000333861 TROAPQ12815 778 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 XRCC4Q13426 336 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 ITPK1Q13572 414 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 LRRC14Q15048 493 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 NLRP10Q86W26 655 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 VGLL2Q8N8G2 317 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 SLC17A8Q8NDX2 589 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 P2RX5Q93086 422 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 FERMT2Q96AC1 680 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 ALS2CR12Q96Q35 445 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 TMEM260Q9NX78 707 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 FBXL5Q9UKA1 691 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 PNMA2Q9UL42 364 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 C15orf41Q9Y2V0 281 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 NR2E1Q9Y466 385 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 UTRNP46939 3433 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 NPHP3-ACAD11A0A0J9YXS1 232 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 CCNT1O60563 726 aaKnown RBP12.18□□□□□ -0.46
CCDC87-201ENST00000333861 SHBGP04278 402 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 KRT71Q3SY84 523 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 AADACL2Q6P093 401 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 ERICH1Q86X53 443 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 ESR2Q92731 530 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 IKZF4Q9H2S9 585 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 PIDD1Q9HB75 910 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 ABCF3Q9NUQ8 709 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 TFCP2L1Q9NZI6 479 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 DOT1LQ8TEK3 1739 aa12.18□□□□□ -0.46
CCDC87-201ENST00000333861 TRIM37O94972 964 aa12.17□□□□□ -0.46
CCDC87-201ENST00000333861 ZBTB38Q8NAP3 1195 aaPredicted RBP12.17□□□□□ -0.46
CCDC87-201ENST00000333861 CCDC26Q8TAB7 109 aa12.17□□□□□ -0.46
CCDC87-201ENST00000333861 RNF26Q9BY78 433 aaPredicted RBP12.17□□□□□ -0.46
CCDC87-201ENST00000333861 ETAA1Q9NY74 926 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms