RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 BCAS3Q9H6U6 928 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.66■□□□□ 0.421e-6■■□□□ 13.6
PGBD2-201ENST00000329291 PPP2R3BQ9Y5P8 575 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 A0A0U1RQJ8 604 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 PSMD10O75832 226 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 ARP10275 920 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
PGBD2-201ENST00000329291 PPP1R2P41236 205 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 KLK7P49862 253 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 CPXCR1Q8N123 301 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 ATRIPQ8WXE1 791 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 EIF2AK1Q9BQI3 630 aaKnown RBP17.65■□□□□ 0.42
PGBD2-201ENST00000329291 RAVER2Q9HCJ3 691 aaKnown RBP17.65■□□□□ 0.42
PGBD2-201ENST00000329291 POLD4Q9HCU8 107 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 GGA3Q9NZ52 723 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 SLC26A4O43511 780 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 EPS15P42566 896 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 HSD17B4P51659 736 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 SPP2Q13103 211 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 MUM1L1Q5H9M0 696 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 FAM26FQ5R3K3 315 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 HAUS3Q68CZ6 603 aa17.65■□□□□ 0.42
PGBD2-201ENST00000329291 BMP2KQ9NSY1 1161 aaPredicted RBP17.65■□□□□ 0.42
PGBD2-201ENST00000329291 TTC26A0AVF1 554 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 VCAM1P19320 739 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 ERVK-24P63145 666 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 CEP55Q53EZ4 464 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 CNGA4Q8IV77 575 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 ERMNQ8TAM6 284 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 SLC5A5Q92911 643 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 HSD17B14Q9BPX1 270 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 TANGO6Q9C0B7 1094 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 ABHD10Q9NUJ1 306 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 ZNF112Q9UJU3 913 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 DNM3Q9UQ16 869 aa17.64■□□□□ 0.41
PGBD2-201ENST00000329291 ZBTB39O15060 712 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 ERCC3P19447 782 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 FECHP22830 423 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 MTIF2P46199 727 aaKnown RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 HIRAP54198 1017 aaPredicted RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 USP14P54578 494 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 GIT2Q14161 759 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 CTTNQ14247 550 aaKnown RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 HERC4Q5GLZ8 1057 aaPredicted RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 LRRC55Q6ZSA7 311 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 MYOCDQ8IZQ8 938 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 SYT2Q8N9I0 419 aaPredicted RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 IL31RAQ8NI17 732 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 KIF18AQ8NI77 898 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 WNK4Q96J92 1243 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 SYT17Q9BSW7 474 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 MRPL44Q9H9J2 332 aaKnown RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 SLC38A10Q9HBR0 1119 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 PICK1Q9NRD5 415 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 HOMER2Q9NSB8 354 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 RNF181Q9P0P0 153 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 A0A1W2PQC6 194 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 FRMD3A2A2Y4 597 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 CTIFO43310 598 aaKnown RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 CHMP2AO43633 222 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 FLOT1O75955 427 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 SLITRK3O94933 977 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 KRT9P35527 623 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 TBC1D8BQ0IIM8 1120 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 ZCWPW2Q504Y3 356 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 LRCH2Q5VUJ6 765 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 WRNIP1Q96S55 665 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 POLR3CQ9BUI4 534 aaPredicted RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 NOC4LQ9BVI4 516 aaKnown RBP17.63■□□□□ 0.41
PGBD2-201ENST00000329291 AS3MTQ9HBK9 375 aa17.63■□□□□ 0.41
PGBD2-201ENST00000329291 ZSCAN12O43309 604 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 ALAS1P13196 640 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 ITGB5P18084 799 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 DNM2P50570 870 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 ETF1P62495 437 aaKnown RBP17.62■□□□□ 0.41
PGBD2-201ENST00000329291 NAA30Q147X3 362 aaPredicted RBP17.62■□□□□ 0.41
PGBD2-201ENST00000329291 DLK2Q6UY11 383 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 NELFCDQ8IXH7 590 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 CCDC65Q8IXS2 484 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 PIGOQ8TEQ8 1089 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 SCFD1Q8WVM8 642 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 RPAP3Q9H6T3 665 aaPredicted RBP17.62■□□□□ 0.41
PGBD2-201ENST00000329291 ADGRG1Q9Y653 693 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 CCP110O43303 1012 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 CASP5P51878 434 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 SYCP1Q15431 976 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 FAM114A1Q8IWE2 563 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 ZNF710Q8N1W2 664 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 CCDC51Q96ER9 411 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 DYDC2Q96IM9 177 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 REEP2Q9BRK0 252 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 RUSC1Q9BVN2 902 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 BHMT2Q9H2M3 363 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 ZHX3Q9H4I2 956 aa17.62■□□□□ 0.41
PGBD2-201ENST00000329291 WRAP73Q9P2S5 460 aaPredicted RBP17.62■□□□□ 0.41
PGBD2-201ENST00000329291 SBF1O95248 1867 aa17.61■□□□□ 0.41
PGBD2-201ENST00000329291 RSPH10B2B2RC85 870 aa17.61■□□□□ 0.41
PGBD2-201ENST00000329291 KIF2AO00139 706 aaPredicted RBP17.61■□□□□ 0.41
PGBD2-201ENST00000329291 DDNO94850 711 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms