RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 C21orf2O43822 256 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 GH2P01242 217 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 JAG1P78504 1218 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 PRR16Q569H4 304 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 POTEBQ6S5H4 581 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 HAS1Q92839 578 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 RIC8AQ9NPQ8 531 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 MAP2K2P36507 400 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 CNNM4Q6P4Q7 775 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 FGFBP2Q9BYJ0 223 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 RAB34Q9BZG1 259 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 SAR1BQ9Y6B6 198 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 MYO1FO00160 1098 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 NDUFA10O95299 355 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 PLEKP08567 350 aaPredicted RBP17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 GNGT1P63211 74 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 EZH2Q15910 746 aaKnown RBP17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 HHIPL2Q6UWX4 724 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 CCDC51Q96ER9 411 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 C7orf25Q9BPX7 421 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 CAPS2Q9BXY5 557 aa17.18■□□□□ 0.34
SHROOM1-201ENST00000319854 FAM170AA1A519 330 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 RAD17O75943 681 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 EEF1GP26641 437 aaKnown RBP17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 UBXN2AP68543 259 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 MAP9Q49MG5 647 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 KIAA1328Q86T90 577 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 HDAC7Q8WUI4 952 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 DHTKD1Q96HY7 919 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 PRMT6Q96LA8 375 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 THAP9Q9H5L6 903 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 DUSP10Q9Y6W6 482 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 F5H6K3 240 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 PSMD14O00487 310 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 HERVK_113P62684 666 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 CYP4A11Q02928 519 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 KLRC3Q07444 240 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 PODNQ7Z5L7 613 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 PI4KBQ9UBF8 816 aa17.17■□□□□ 0.34
SHROOM1-201ENST00000319854 ITIH6Q6UXX5 1313 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 MACROD2A1Z1Q3 448 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 GOLGA6BA6NDN3 693 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 INPP5BP32019 993 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 C2orf54Q08AI8 447 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 CSRNP1Q96S65 589 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 ESYT2A0FGR8 921 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 BICDL2A1A5D9 508 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 RCCD1A6NED2 376 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 EPHB6O15197 1021 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 EIF3HO15372 352 aaKnown RBP eCLIP17.16■□□□□ 0.342e-6■■■□□ 15.9
SHROOM1-201ENST00000319854 DACT2Q5SW24 774 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 CCDC84Q86UT8 332 aaPredicted RBP17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 CYP2W1Q8TAV3 490 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 RAD54LQ92698 747 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 AKT1S1Q96B36 256 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 FAM107BQ9H098 131 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 CAPN7Q9Y6W3 813 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 POTEFA5A3E0 1075 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 PPIP5K2O43314 1243 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 CCDC172P0C7W6 258 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 POTEIP0CG38 1075 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 DNM2P50570 870 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 PPFIA1Q13136 1202 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 CCDC122Q5T0U0 273 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 WDR59Q6PJI9 974 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 POTEGQ6S5H5 508 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 POTEEQ6S8J3 1075 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 ZNF507Q8TCN5 953 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 SMCR8Q8TEV9 937 aaPredicted RBP17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 CUEDC2Q9H467 287 aa17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
SHROOM1-201ENST00000319854 NT5C2P49902 561 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 APBA1Q02410 837 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 FKBP15Q5T1M5 1219 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 ARL8AQ96BM9 186 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 ZDHHC15Q96MV8 337 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 ECE1P42892 770 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 NOVP48745 357 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 PAPD7Q5XG87 772 aaKnown RBP17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 TRMT1LQ7Z2T5 733 aaKnown RBP17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 SIAH1Q8IUQ4 282 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 JAKMIP2Q96AA8 810 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 SUGT1Q9Y2Z0 365 aa17.15■□□□□ 0.34
SHROOM1-201ENST00000319854 TARSL2A2RTX5 802 aaKnown RBP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 TRAF5O00463 557 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 RRP1BQ14684 758 aaKnown RBP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 SND1Q7KZF4 910 aaKnown RBP eCLIP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 MIGA2Q7L4E1 593 aa17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 JPH2Q9BR39 696 aaPredicted RBP17.14■□□□□ 0.33
SHROOM1-201ENST00000319854 ANO3Q9BYT9 981 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms