RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 USP17L18D6R9N7 530 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 USP17L22D6RA61 530 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 USP17L17D6RBQ6 530 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 USP17L19D6RCP7 530 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 USP17L20D6RJB6 530 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 AGPSO00116 658 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 CCNT1O60563 726 aaKnown RBP17.66■□□□□ 0.42
USH1C-202ENST00000318024 TNNT3P45378 269 aaPredicted RBP17.66■□□□□ 0.42
USH1C-202ENST00000318024 ATP2C1P98194 919 aaPredicted RBP17.66■□□□□ 0.42
USH1C-202ENST00000318024 USP17L24Q0WX57 530 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 NONOQ15233 471 aaKnown RBP eCLIP17.66■□□□□ 0.42
USH1C-202ENST00000318024 USP17L6PQ6QN14 398 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 COG1Q8WTW3 980 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 HDAC6Q9UBN7 1215 aa17.66■□□□□ 0.42
USH1C-202ENST00000318024 ESYT2A0FGR8 921 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 ATP1A1P05023 1023 aaKnown RBP17.65■□□□□ 0.42
USH1C-202ENST00000318024 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 IL17AQ16552 155 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 KRT25Q7Z3Z0 450 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 ZNF507Q8TCN5 953 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 AFAP1L1Q8TED9 768 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 STAMQ92783 540 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 TMEM60Q9H2L4 133 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
USH1C-202ENST00000318024 ADARB2Q9NS39 739 aaKnown RBP17.65■□□□□ 0.42
USH1C-202ENST00000318024 TTC26A0AVF1 554 aa17.64■□□□□ 0.42
USH1C-202ENST00000318024 PAK1Q13153 545 aa17.64■□□□□ 0.42
USH1C-202ENST00000318024 DCAF15Q66K64 600 aa17.64■□□□□ 0.42
USH1C-202ENST00000318024 CCDC174Q6PII3 467 aa17.64■□□□□ 0.42
USH1C-202ENST00000318024 PLCD3Q8N3E9 789 aa17.64■□□□□ 0.42
USH1C-202ENST00000318024 CUL5Q93034 780 aa17.64■□□□□ 0.42
USH1C-202ENST00000318024 GTPBP6O43824 516 aaPredicted RBP17.64■□□□□ 0.41
USH1C-202ENST00000318024 ZNF658Q5TYW1 1059 aaPredicted RBP17.64■□□□□ 0.41
USH1C-202ENST00000318024 RRAGBQ5VZM2 374 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 DPY19L2Q6NUT2 758 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 BTNL9Q6UXG8 535 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 FBXO11Q86XK2 927 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 C4orf32Q8N8J7 132 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 AMNQ9BXJ7 453 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 BLZF1Q9H2G9 400 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 SH2D4AQ9H788 454 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 SYNPO2Q9UMS6 1093 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 GUCA1BQ9UMX6 200 aa17.64■□□□□ 0.41
USH1C-202ENST00000318024 DICER1Q9UPY3 1922 aaKnown RBP17.63■□□□□ 0.41
USH1C-202ENST00000318024 ADM5C9JUS6 153 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 ENC1O14682 589 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 MCM3P25205 808 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 BRD2P25440 801 aaKnown RBP17.63■□□□□ 0.41
USH1C-202ENST00000318024 SPP2Q13103 211 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 MTMR2Q13614 643 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 MEA1Q16626 185 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 ICE2Q659A1 982 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 GOLGA6L1Q8N7Z2 621 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 OR8K1Q8NGG5 319 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 NELFBQ8WX92 580 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 RPGRIP1Q96KN7 1286 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 SAR1BQ9Y6B6 198 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 A0A1W2PQC6 194 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 MYBL2P10244 700 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 MRPL12P52815 198 aaKnown RBP17.63■□□□□ 0.41
USH1C-202ENST00000318024 NEK8Q86SG6 692 aa17.63■□□□□ 0.41
USH1C-202ENST00000318024 TTC31Q49AM3 519 aaPredicted RBP17.62■□□□□ 0.41
USH1C-202ENST00000318024 MAP9Q49MG5 647 aa17.62■□□□□ 0.41
USH1C-202ENST00000318024 CCNI2Q6ZMN8 369 aaPredicted RBP17.62■□□□□ 0.41
USH1C-202ENST00000318024 MB21D1Q8N884 522 aa17.62■□□□□ 0.41
USH1C-202ENST00000318024 RIN2Q8WYP3 895 aaPredicted RBP17.62■□□□□ 0.41
USH1C-202ENST00000318024 PURBQ96QR8 312 aaKnown RBP17.62■□□□□ 0.41
USH1C-202ENST00000318024 CAPN11Q9UMQ6 739 aa17.62■□□□□ 0.41
USH1C-202ENST00000318024 PDE2AO00408 941 aaPredicted RBP17.62■□□□□ 0.41
USH1C-202ENST00000318024 SRGAP2O75044 1071 aa17.62■□□□□ 0.41
USH1C-202ENST00000318024 PPP1R18Q6NYC8 613 aa17.62■□□□□ 0.41
USH1C-202ENST00000318024 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.62■□□□□ 0.41
USH1C-202ENST00000318024 DCPSQ96C86 337 aaKnown RBP17.62■□□□□ 0.41
USH1C-202ENST00000318024 TTYH3Q9C0H2 523 aa17.62■□□□□ 0.41
USH1C-202ENST00000318024 TFR2Q9UP52 801 aa17.62■□□□□ 0.41
USH1C-202ENST00000318024 LGALS16A8MUM7 142 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 EDIL3O43854 480 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 PRCPP42785 496 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 CLK2P49760 499 aaKnown RBP17.61■□□□□ 0.41
USH1C-202ENST00000318024 UBXN1Q04323 297 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 STIM1Q13586 685 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 SCYL3Q8IZE3 742 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 CHURC1Q8WUH1 139 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 PPM1EQ8WY54 764 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 KLRG1Q96E93 195 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 PICK1Q9NRD5 415 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 ZNF112Q9UJU3 913 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 ZHX2Q9Y6X8 837 aa17.61■□□□□ 0.41
USH1C-202ENST00000318024 RCCD1A6NED2 376 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 PTPRAP18433 802 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 GGCXP38435 758 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 SULF1Q8IWU6 871 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 UIMC1Q96RL1 719 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 PLEKHA4Q9H4M7 779 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 YY1AP1Q9H869 796 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 GDAQ9Y2T3 454 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 RASSF10A6NK89 507 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 MEIS2O14770 477 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 TDP2O95551 362 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms