RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 BAG3O95817 575 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 KRT31Q15323 416 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 Q4G0T1 1027 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 WLSQ5T9L3 541 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 TMEM154Q6P9G4 183 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 WDR75Q8IWA0 830 aaKnown RBP11.44□□□□□ -0.58
MSRB3-201ENST00000308259 SRBD1Q8N5C6 995 aaKnown RBP11.44□□□□□ -0.58
MSRB3-201ENST00000308259 GORASP1Q9BQQ3 440 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 RNF41Q9H4P4 317 aaPredicted RBP11.44□□□□□ -0.58
MSRB3-201ENST00000308259 SCOCQ9UIL1 159 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 GMNCA6NCL1 334 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 ATP4AP20648 1035 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 KRT9P35527 623 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 SH3BGRP55822 239 aaPredicted RBP11.44□□□□□ -0.58
MSRB3-201ENST00000308259 PDE1CQ14123 709 aaPredicted RBP11.44□□□□□ -0.58
MSRB3-201ENST00000308259 IL17AQ16552 155 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 NANOGNBQ7Z5D8 188 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 RRP36Q96EU6 259 aaKnown RBP11.44□□□□□ -0.58
MSRB3-201ENST00000308259 MMS19Q96T76 1030 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 CHP1Q99653 195 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 CD2APQ9Y5K6 639 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 XDHP47989 1333 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 XBP1P17861 261 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 TRIM21P19474 475 aaKnown RBP11.43□□□□□ -0.58
MSRB3-201ENST00000308259 ERVK-24P63145 666 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 PLCB4Q15147 1175 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 MIS18BP1Q6P0N0 1132 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 OLFML1Q6UWY5 402 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 CCDC155Q8N6L0 562 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 PHF20Q9BVI0 1012 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 CPVLQ9H3G5 476 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 RAD21O60216 631 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 DRP2Q13474 957 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 TBC1D25Q3MII6 688 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 OGFOD1Q8N543 542 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 MYH7P12883 1935 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 MFAP3LO75121 409 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 PAK2Q13177 524 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 PTGISQ16647 500 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 CC2D2BQ6DHV5 1058 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 MAIP1Q8WWC4 291 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 NAA15Q9BXJ9 866 aaKnown RBP11.43□□□□□ -0.58
MSRB3-201ENST00000308259 NARFQ9UHQ1 456 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 SLIT2O94813 1529 aa11.43□□□□□ -0.58
MSRB3-201ENST00000308259 MYL1P05976 194 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 SH2D4BQ5SQS7 431 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 KANK3Q6NY19 840 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 B4DLN1 442 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 RTN2O75298 545 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 SUPT3HO75486 399 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 GNAT2P19087 354 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 NELFBQ8WX92 580 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 RNF26Q9BY78 433 aaPredicted RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 STRCP1A6NGW2 1772 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 ERCC5P28715 1186 aaPredicted RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 IFNAR2P48551 515 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 EPHB4P54760 987 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 INHBEP58166 350 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 FUT2Q10981 343 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 KIF5AQ12840 1032 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 KRT71Q3SY84 523 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 KBTBD12Q3ZCT8 623 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 INTS5Q6P9B9 1019 aaKnown RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 TMTC1Q8IUR5 882 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 NSRP1Q9H0G5 558 aaKnown RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 USO1O60763 962 aaKnown RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 COQ9O75208 318 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 ATP2A2P16615 1042 aaKnown RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 MAGEA8P43361 318 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 FNTAP49354 379 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 UBXN1Q04323 297 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 TROAPQ12815 778 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 NPY5RQ15761 445 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 ERFEQ4G0M1 354 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 ZSCAN29Q8IWY8 852 aaPredicted RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 SPATA20Q8TB22 786 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 DTNBP1Q96EV8 351 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 RBM41Q96IZ5 413 aaKnown RBP11.42□□□□□ -0.58
MSRB3-201ENST00000308259 RPGRIP1Q96KN7 1286 aa11.42□□□□□ -0.58
MSRB3-201ENST00000308259 UBR2Q8IWV8 1755 aa11.41□□□□□ -0.58
MSRB3-201ENST00000308259 SRCAPQ6ZRS2 3230 aa11.41□□□□□ -0.58
MSRB3-201ENST00000308259 CTNND1O60716 968 aaKnown RBP11.41□□□□□ -0.58
MSRB3-201ENST00000308259 FAM107AO95990 144 aa11.41□□□□□ -0.58
MSRB3-201ENST00000308259 CXCR5P32302 372 aa11.41□□□□□ -0.58
MSRB3-201ENST00000308259 MDH1P40925 334 aaKnown RBP11.41□□□□□ -0.58
MSRB3-201ENST00000308259 LBHD1Q9BQE6 289 aaPredicted RBP11.41□□□□□ -0.58
MSRB3-201ENST00000308259 RIOK1Q9BRS2 568 aaKnown RBP11.41□□□□□ -0.58
MSRB3-201ENST00000308259 GGA1Q9UJY5 639 aa11.41□□□□□ -0.58
MSRB3-201ENST00000308259 CORO1CQ9ULV4 474 aaPredicted RBP11.41□□□□□ -0.58
MSRB3-201ENST00000308259 PHF20L1A8MW92 1017 aa11.41□□□□□ -0.58
MSRB3-201ENST00000308259 PRPF6O94906 941 aaKnown RBP11.41□□□□□ -0.58
MSRB3-201ENST00000308259 PMS1P54277 932 aaKnown RBP11.41□□□□□ -0.58
MSRB3-201ENST00000308259 ITPK1Q13572 414 aa11.41□□□□□ -0.58
MSRB3-201ENST00000308259 CYP26C1Q6V0L0 522 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms