RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 NOD2Q9HC29 1040 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 EPB41L4AQ9HCS5 686 aaPredicted RBP16.29■□□□□ 0.2
SPIDR-201ENST00000297423 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 DNM1LO00429 736 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 TXKP42681 527 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 P2RX5Q93086 422 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 MCM8Q9UJA3 840 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 BTAF1O14981 1849 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 TECP42680 631 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 CCDC38Q502W7 563 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 MTMR8Q96EF0 704 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 ZNF804BA4D1E1 1349 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 ANKRD36CQ5JPF3 1778 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 FAM237AA0A1B0GTK4 181 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 MPHOSPH10O00566 681 aaKnown RBP16.28■□□□□ 0.2
SPIDR-201ENST00000297423 DAPK3O43293 454 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 GYS1P13807 737 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 KLHL30Q0D2K2 578 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 LRRC14Q15048 493 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 PRR5LQ6MZQ0 368 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 KDM7AQ6ZMT4 941 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.28■□□□□ 0.2
SPIDR-201ENST00000297423 CCNHP51946 323 aaPredicted RBP16.28■□□□□ 0.2
SPIDR-201ENST00000297423 STK4Q13043 487 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 GRAPQ13588 217 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 OTUD6AQ7L8S5 288 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 GRAPLQ8TC17 118 aaPredicted RBP16.28■□□□□ 0.2
SPIDR-201ENST00000297423 MYH10P35580 1976 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 TMEM110-MUSTN1A8MSY1 372 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 PPP1R12AO14974 1030 aaPredicted RBP16.28■□□□□ 0.2
SPIDR-201ENST00000297423 FNTAP49354 379 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 SPRED3Q2MJR0 410 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 SGMS1Q86VZ5 419 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 NLGN1Q8N2Q7 840 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 ARMC2Q8NEN0 867 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 LSM14BQ9BX40 385 aaKnown RBP16.28■□□□□ 0.2
SPIDR-201ENST00000297423 ARHGAP20Q9P2F6 1191 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 AMACRQ9UHK6 382 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 THSD7AQ9UPZ6 1657 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 PDHA1P08559 390 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 VEGFAP15692 232 aaPredicted RBP16.28■□□□□ 0.2
SPIDR-201ENST00000297423 RAPGEF5Q92565 580 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 CALR3Q96L12 384 aaKnown RBP16.28■□□□□ 0.2
SPIDR-201ENST00000297423 DNAJC7Q99615 494 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 CPVLQ9H3G5 476 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 PNMA2Q9UL42 364 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 LEMD3Q9Y2U8 911 aa16.28■□□□□ 0.2
SPIDR-201ENST00000297423 ZNF263O14978 683 aa16.27■□□□□ 0.2
SPIDR-201ENST00000297423 SESN3P58005 492 aa16.27■□□□□ 0.2
SPIDR-201ENST00000297423 CABP7Q86V35 215 aa16.27■□□□□ 0.2
SPIDR-201ENST00000297423 ADSSL1Q8N142 457 aa16.27■□□□□ 0.2
SPIDR-201ENST00000297423 FAM133AQ8N9E0 248 aa16.27■□□□□ 0.2
SPIDR-201ENST00000297423 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
SPIDR-201ENST00000297423 ZC3H4Q9UPT8 1303 aaKnown RBP16.27■□□□□ 0.19
SPIDR-201ENST00000297423 C6orf229H3BNL8 230 aa16.27■□□□□ 0.19
SPIDR-201ENST00000297423 EPHB6O15197 1021 aa16.27■□□□□ 0.19
SPIDR-201ENST00000297423 CCNT1O60563 726 aaKnown RBP16.27■□□□□ 0.19
SPIDR-201ENST00000297423 CAPRIN2Q6IMN6 1127 aaKnown RBP16.27■□□□□ 0.19
SPIDR-201ENST00000297423 NDST4Q9H3R1 872 aa16.27■□□□□ 0.19
SPIDR-201ENST00000297423 GNAT2P19087 354 aa16.27■□□□□ 0.19
SPIDR-201ENST00000297423 PPP2R2AP63151 447 aa16.27■□□□□ 0.19
SPIDR-201ENST00000297423 SFMBT2Q5VUG0 894 aa16.27■□□□□ 0.19
SPIDR-201ENST00000297423 DZIP1Q86YF9 867 aaKnown RBP16.27■□□□□ 0.19
SPIDR-201ENST00000297423 SAAL1Q96ER3 474 aa16.27■□□□□ 0.19
SPIDR-201ENST00000297423 COPB2P35606 906 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 HSD17B3P37058 310 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-201ENST00000297423 KCNB1Q14721 858 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 IRF2BP1Q8IU81 584 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 CALML4Q96GE6 196 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 RNF26Q9BY78 433 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-201ENST00000297423 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
SPIDR-201ENST00000297423 OSBPL7Q9BZF2 842 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 DISC1Q9NRI5 854 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 MAGEB6P1A0A0J9YX57 407 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 SRGNP10124 158 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 PLCG1P19174 1290 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 SKOR1P84550 965 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 MTRQ99707 1265 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 TSG101Q99816 390 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 H0Y3Z8 333 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 AP1G2O75843 785 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 ANP32DO95626 131 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 MMEP08473 750 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 ANKRD20A8PQ5CZ79 823 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 ZNF804AQ7Z570 1209 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 KLHL29Q96CT2 875 aa16.26■□□□□ 0.19
SPIDR-201ENST00000297423 FAM84BQ96KN1 310 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-201ENST00000297423 PYM1Q9BRP8 204 aaKnown RBP16.26■□□□□ 0.19
SPIDR-201ENST00000297423 DCDC2CA8MYV0 355 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 GOLGA8HP0CJ92 632 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 PLTPP55058 493 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 PRCCQ92733 491 aaPredicted RBP16.25■□□□□ 0.19
SPIDR-201ENST00000297423 INTS9Q9NV88 658 aaKnown RBP16.25■□□□□ 0.19
SPIDR-201ENST00000297423 SALL4Q9UJQ4 1053 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 MYH3P11055 1940 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 GSG1L2A8MUP6 293 aa16.25■□□□□ 0.19
SPIDR-201ENST00000297423 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms