RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 COL14A1Q05707 1796 aaKnown RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 COL16A1Q07092 1604 aaPredicted RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 MEA1Q16626 185 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 TBC1D9BQ66K14 1250 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 IQCEQ6IPM2 695 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 ANKRD23Q86SG2 305 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 LONP2Q86WA8 852 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 NOSTRINQ8IVI9 506 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 KLHL7Q8IXQ5 586 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 IFT20Q8IY31 132 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 ELOA2Q8IYF1 753 aaPredicted RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 NELFBQ8WX92 580 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 TTYH3Q9C0H2 523 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 TRPC5Q9UL62 973 aaPredicted RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 STXBP3O00186 592 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 LIN7AO14910 233 aaPredicted RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 EPHB6O15197 1021 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 PARP1P09874 1014 aaKnown RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 SPATA31D3P0C874 917 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 HSPA9P38646 679 aaKnown RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 ZAP70P43403 619 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 CTDSPL2Q05D32 466 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 MYBPC3Q14896 1274 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 RINLQ6ZS11 566 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 SPATA31D4Q6ZUB0 917 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 CCDC197Q8NCU1 140 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 SETDB2Q96T68 719 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 CEP131Q9UPN4 1083 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 CD2APQ9Y5K6 639 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 PKD1L3Q7Z443 1732 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 STK36Q9NRP7 1315 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 MRC1P22897 1456 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 SRRM3A6NNA2 597 aaPredicted RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 IFIT3O14879 490 aaKnown RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 CTNND1O60716 968 aaKnown RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 IGHMBP2P38935 993 aaKnown RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 METAP2P50579 478 aaKnown RBP eCLIP9.62□□□□□ -0.87
VAPB-201ENST00000265619 KRT83P78385 493 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 KIF5AQ12840 1032 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 KLHDC7AQ5VTJ3 777 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 DIS3L2Q8IYB7 885 aaKnown RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 CHMP6Q96FZ7 201 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 SLC26A6Q9BXS9 759 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 MMADHCQ9H3L0 296 aaPredicted RBP9.62□□□□□ -0.87
VAPB-201ENST00000265619 ECT2Q9H8V3 914 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 PLCB1Q9NQ66 1216 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 ZNF652Q9Y2D9 606 aa9.62□□□□□ -0.87
VAPB-201ENST00000265619 SEMA3EO15041 775 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 PDE8AO60658 829 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 PAEPP09466 180 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 ATP2A2P16615 1042 aaKnown RBP9.61□□□□□ -0.87
VAPB-201ENST00000265619 CTNNA1P35221 906 aaKnown RBP9.61□□□□□ -0.87
VAPB-201ENST00000265619 ITIH3Q06033 890 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 TYW1BQ6NUM6 668 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 C3orf67Q6ZVT6 689 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 LPIN2Q92539 896 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 XPO6Q96QU8 1125 aaKnown RBP9.61□□□□□ -0.87
VAPB-201ENST00000265619 ARHGAP20Q9P2F6 1191 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 FBXL5Q9UKA1 691 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 HYOU1Q9Y4L1 999 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 TOGARAM1Q9Y4F4 1720 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 SIPA1L3O60292 1781 aaPredicted RBP9.61□□□□□ -0.87
VAPB-201ENST00000265619 ATP6V1G1O75348 118 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 CDKL5O76039 1030 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 FTCDO95954 541 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 IMPDH2P12268 514 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 GM2AP17900 193 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 PRCPP42785 496 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 HLTFQ14527 1009 aaKnown RBP eCLIP9.61□□□□□ -0.87
VAPB-201ENST00000265619 BARGINQ6ZT62 677 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 TRPM8Q7Z2W7 1104 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 GPR101Q96P66 508 aaPredicted RBP9.61□□□□□ -0.87
VAPB-201ENST00000265619 LBHD1Q9BQE6 289 aaPredicted RBP9.61□□□□□ -0.87
VAPB-201ENST00000265619 PREBQ9HCU5 417 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 UTYO14607 1347 aa9.61□□□□□ -0.87
VAPB-201ENST00000265619 DISP2A7MBM2 1401 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 SP100P23497 879 aaPredicted RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 CCND1P24385 295 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 PHKA1P46020 1223 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 RABL6Q3YEC7 729 aaPredicted RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 ZC2HC1CQ53FD0 456 aaPredicted RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 ERMARDQ5T6L9 678 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 TMEM154Q6P9G4 183 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 FBXL16Q8N461 479 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 UBLCP1Q8WVY7 318 aaPredicted RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 UTP4Q969X6 686 aaKnown RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 ADAM7Q9H2U9 754 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 PCDHA13Q9Y5I0 950 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 SRPRBQ9Y5M8 271 aaKnown RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 LRP6O75581 1613 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 CAMTA2O94983 1202 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 CHN1P15882 459 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 ABCD1P33897 745 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 STAT6P42226 847 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 ZNF662Q6ZS27 426 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms