RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 STAT1P42224 750 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 CALCOCO2Q13137 446 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 CYP26C1Q6V0L0 522 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 TIGD1Q96MW7 591 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 TMEM47Q9BQJ4 181 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 MYL10Q9BUA6 226 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 FHDC1Q9C0D6 1143 aaPredicted RBP14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 PRDM5Q9NQX1 630 aaPredicted RBP14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 ODF2LQ9ULJ1 636 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 FKTNO75072 461 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 IL1R1P14778 569 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 KRT17Q04695 432 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 RPUSD2Q8IZ73 545 aaKnown RBP14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 LSG1Q9H089 658 aaKnown RBP14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 MED1Q15648 1581 aaPredicted RBP14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 A0A1W2PQ27 194 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 A0A1W2PQ64 194 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 A0A1W2PQD8 194 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 TBCKQ8TEA7 893 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 CLSTN2Q9H4D0 955 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 KCNJ14Q9UNX9 436 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 MEGF6O75095 1541 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 SNRPFP62306 86 aaKnown RBP14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 CCDC15Q0P6D6 951 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 LGSNQ5TDP6 509 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 SFMBT2Q5VUG0 894 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 PPM1EQ8WY54 764 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 FLT1P17948 1338 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 FAM205AQ6ZU69 1335 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 K7ERI5 159 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 PPIL2Q13356 520 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 AKR1B15C9JRZ8 316 aaPredicted RBP14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 SART1O43290 800 aaKnown RBP14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 PPARGP37231 505 aaPredicted RBP14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 PFKFB3Q16875 520 aaPredicted RBP14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 ARL13BQ3SXY8 428 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 MTERF2Q49AM1 385 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 MAEAQ7L5Y9 396 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 SLC9A2Q9UBY0 812 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 KIAA0754O94854 1291 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 TXNP10599 105 aaKnown RBP14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 RNF139Q8WU17 664 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 TUFT1Q9NNX1 390 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 CPSF3Q9UKF6 684 aaKnown RBP14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 ADAMTSL3P82987 1691 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 TNNT1P13805 278 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 SLC26A2P50443 739 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 GABPAQ06546 454 aa14.68□□□□□ -0.06
PRPF38A-201ENST00000257181 RAB3IL1Q8TBN0 382 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 OSBP2Q969R2 916 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 GSDMAQ96QA5 445 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 PUS7LQ9H0K6 701 aaKnown RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 CACYBPQ9HB71 228 aaKnown RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 MMP1P03956 469 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 ANO6Q4KMQ2 910 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 RINT1Q6NUQ1 792 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 CTR9Q6PD62 1173 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 RSRC2Q7L4I2 434 aaKnown RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 NELFBQ8WX92 580 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 GPKOWQ92917 476 aaPredicted RBP eCLIP14.67□□□□□ -0.063e-7■□□□□ 9.9
PRPF38A-201ENST00000257181 GPRASP2Q96D09 838 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 DYNLL2Q96FJ2 89 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 MRPL4Q9BYD3 311 aaKnown RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 SKIV2LQ15477 1246 aaKnown RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 SEPT1Q8WYJ6 367 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 EDC3Q96F86 508 aaKnown RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 PLIN2Q99541 437 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 ANKFY1Q9P2R3 1169 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 POLR1AO95602 1720 aaPredicted RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 NNMTP40261 264 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 TWF2Q6IBS0 349 aaKnown RBP14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 DYMQ7RTS9 669 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 AOPEPQ8N6M6 819 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 KIAA1024Q9UPX6 916 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 PCDHA10Q9Y5I2 948 aa14.67□□□□□ -0.06
PRPF38A-201ENST00000257181 TMEM88BA6NKF7 163 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 RNF8O76064 485 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 HEXIM1O94992 359 aaKnown RBP14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 QARSP47897 775 aaKnown RBP14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 HLTFQ14527 1009 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 EPHA7Q15375 998 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 BZW1Q7L1Q6 419 aaKnown RBP14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 FBXO18Q8NFZ0 1043 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 SH3TC2Q8TF17 1288 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 GRK7Q8WTQ7 553 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 PRPF31Q8WWY3 499 aaKnown RBP14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 LRRC4Q9HBW1 653 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 NCOA5Q9HCD5 579 aaKnown RBP14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 IMPACTQ9P2X3 320 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 FAM8A1Q9UBU6 413 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 MROH7Q68CQ1 1323 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 MUTP22033 750 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 TYRO3Q06418 890 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 TMTC1Q8IUR5 882 aa14.66□□□□□ -0.06
PRPF38A-201ENST00000257181 ALDH8A1Q9H2A2 487 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms