RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 HOOK3Q86VS8 718 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 ASIC3Q9UHC3 531 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 PTPN22Q9Y2R2 807 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 EIF3HO15372 352 aaKnown RBP eCLIP19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 EEF2P13639 858 aaKnown RBP19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 TTI2Q6NXR4 508 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 CEP95Q96GE4 821 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 DNAJC7Q99615 494 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 HDAC9Q9UKV0 1011 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 CFBP00751 764 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 CCNL1Q9UK58 526 aaPredicted RBP19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 PLA2G4BP0C869 781 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 SYCE1Q8N0S2 351 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 SWAP70Q9UH65 585 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 TNS3Q68CZ2 1445 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 RCCD1A6NED2 376 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 ORC4O43929 436 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 SNAP25P60880 206 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 TMEM132AQ24JP5 1023 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 GSTA5Q7RTV2 222 aa19.19■□□□□ 0.66
NDFIP1-201ENST00000253814 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 C8orf37Q96NL8 207 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 SH3GLB2Q9NR46 395 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 MTUS1Q9ULD2 1270 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 POTEB3A0JP26 581 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 POTECB2RU33 542 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L15C9J2P7 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L13C9JLJ4 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L11C9JVI0 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L18D6R9N7 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L22D6RA61 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L17D6RBQ6 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L19D6RCP7 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L20D6RJB6 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L24Q0WX57 530 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 GRM4Q14833 912 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 USP17L6PQ6QN14 398 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 POTEBQ6S5H4 581 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 NAP1L3Q99457 506 aaPredicted RBP19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 RIOK1Q9BRS2 568 aaKnown RBP19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 KCNH2Q12809 1159 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 PAPD7Q5XG87 772 aaKnown RBP19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 CCDC174Q6PII3 467 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 SH3RF1Q7Z6J0 888 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 PACS2Q86VP3 889 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 VGLL2Q8N8G2 317 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 WHAMMQ8TF30 809 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 RAB17Q9H0T7 212 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 ARHGAP20Q9P2F6 1191 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 AMACRQ9UHK6 382 aa19.18■□□□□ 0.66
NDFIP1-201ENST00000253814 NPHP3-ACAD11A0A0J9YXS1 232 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 KLRC1P26715 233 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 COASYQ13057 564 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 TNIP1Q15025 636 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 MYO1FO00160 1098 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 FGGP02679 453 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 ACTN1P12814 892 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 UBXN2AP68543 259 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 PDXDC1Q6P996 788 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 GCNT4Q9P109 453 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 RNF14Q9UBS8 474 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 NRXN3Q9Y4C0 1643 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 KDM3AQ9Y4C1 1321 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 CETN2P41208 172 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 PLCB3Q01970 1234 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 TMED8Q6PL24 325 aaPredicted RBP19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 GUF1Q8N442 669 aaKnown RBP19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 USP40Q9NVE5 1235 aa19.17■□□□□ 0.66
NDFIP1-201ENST00000253814 MAGOHP61326 146 aaKnown RBP19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 ZNF211Q13398 564 aaPredicted RBP19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 HIBCHQ6NVY1 386 aaPredicted RBP19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 MAGOHBQ96A72 148 aaKnown RBP19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 PLAGL2Q9UPG8 496 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 AFPP02771 609 aaKnown RBP19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 MESDQ14696 234 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 PLVAPQ9BX97 442 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 CEP72Q9P209 647 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 TACC3Q9Y6A5 838 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 DAPK3O43293 454 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 KCNQ2O43526 872 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 CTNNA2P26232 953 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 ZKSCAN8Q15776 578 aaPredicted RBP19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 TRAPPC3LQ5T215 181 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 C12orf60Q5U649 245 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 NLRP14Q86W24 1093 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 UBL4BQ8N7F7 174 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 RNPC3Q96LT9 517 aaKnown RBP19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 REXO2Q9Y3B8 237 aaKnown RBP19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 DAAM1Q9Y4D1 1078 aa19.16■□□□□ 0.66
NDFIP1-201ENST00000253814 PPP1R37O75864 691 aa19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 TMOD1P28289 359 aa19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 SP4Q02446 784 aa19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 FAM133BQ5BKY9 247 aaKnown RBP19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 STMN4Q9H169 189 aaPredicted RBP19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 DNAJC17Q9NVM6 304 aaKnown RBP19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 TMOD2Q9NZR1 351 aa19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 BCS1LQ9Y276 419 aa19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 HMGB1P1B2RPK0 211 aaPredicted RBP19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 STAT3P40763 770 aa19.15■□□□□ 0.66
NDFIP1-201ENST00000253814 RAD54LQ92698 747 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms