RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 LINC00301Q8NCQ3 95 aa19.76■□□□□ 0.75
HOXC6-201ENST00000243108 PPP1R13LQ8WUF5 828 aa19.76■□□□□ 0.75
HOXC6-201ENST00000243108 IWS1Q96ST2 819 aa19.76■□□□□ 0.75
HOXC6-201ENST00000243108 MPHOSPH6Q99547 160 aaKnown RBP19.76■□□□□ 0.75
HOXC6-201ENST00000243108 MAP3K14Q99558 947 aa19.76■□□□□ 0.75
HOXC6-201ENST00000243108 PNMA6FA0A0J9YX94 578 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 PRPF3O43395 683 aaKnown RBP19.75■□□□□ 0.75
HOXC6-201ENST00000243108 ZEB2O60315 1214 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 PLEKHA8P1O95397 391 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 MMP1P03956 469 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 LY6KQ17RY6 165 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 ARHGEF16Q5VV41 709 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 TMTC3Q6ZXV5 915 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 CMTR1Q8N1G2 835 aaKnown RBP19.75■□□□□ 0.75
HOXC6-201ENST00000243108 IL31RAQ8NI17 732 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 BICD2Q8TD16 824 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 TRPV6Q9H1D0 765 aa19.75■□□□□ 0.75
HOXC6-201ENST00000243108 A6NJR5 290 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 RGS20O76081 388 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 NR3C2P08235 984 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 TTLL4Q14679 1199 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 STXBP2Q15833 593 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 GPR153Q6NV75 609 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 SRBD1Q8N5C6 995 aaKnown RBP19.74■□□□□ 0.75
HOXC6-201ENST00000243108 FUCA2Q9BTY2 467 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 DACT1Q9NYF0 836 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 CLIC4Q9Y696 253 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 UMODL1Q5DID0 1318 aa19.74■□□□□ 0.75
HOXC6-201ENST00000243108 B4DLN1 442 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 NKRFO15226 690 aaKnown RBP eCLIP19.73■□□□□ 0.75
HOXC6-201ENST00000243108 B4GALT4O60513 344 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 MYL3P08590 195 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 CPT1AP50416 773 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 MRPL12P52815 198 aaKnown RBP19.73■□□□□ 0.75
HOXC6-201ENST00000243108 C16orf59Q7L2K0 433 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 CTCFLQ8NI51 663 aaPredicted RBP19.73■□□□□ 0.75
HOXC6-201ENST00000243108 KCNG4Q8TDN1 519 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 PDCD2LQ9BRP1 358 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 SPZ1Q9BXG8 430 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 PPP1R12CQ9BZL4 782 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 NUP62CLQ9H1M0 184 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 CNTNAP5Q8WYK1 1306 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 FPGSQ05932 587 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 ARHGAP1Q07960 439 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 PKN1Q16512 942 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 MFSD5Q6N075 450 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 RBM43Q6ZSC3 357 aaKnown RBP19.73■□□□□ 0.75
HOXC6-201ENST00000243108 CCDC82Q8N4S0 544 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 DEFB123Q8N688 67 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 ZFP91Q96JP5 570 aaPredicted RBP19.73■□□□□ 0.75
HOXC6-201ENST00000243108 CLSTN2Q9H4D0 955 aa19.73■□□□□ 0.75
HOXC6-201ENST00000243108 NR1I2O75469 434 aa19.72■□□□□ 0.75
HOXC6-201ENST00000243108 EIF3JO75822 258 aaKnown RBP19.72■□□□□ 0.75
HOXC6-201ENST00000243108 CYP2C18P33260 490 aa19.72■□□□□ 0.75
HOXC6-201ENST00000243108 AKAP17AQ02040 695 aaKnown RBP19.72■□□□□ 0.75
HOXC6-201ENST00000243108 PGM5Q15124 567 aa19.72■□□□□ 0.75
HOXC6-201ENST00000243108 SAFBQ15424 915 aaKnown RBP eCLIP19.72■□□□□ 0.75
HOXC6-201ENST00000243108 FOXP1Q9H334 677 aaPredicted RBP19.72■□□□□ 0.75
HOXC6-201ENST00000243108 MAP3K20Q9NYL2 800 aaKnown RBP19.72■□□□□ 0.75
HOXC6-201ENST00000243108 DDX41Q9UJV9 622 aaKnown RBP19.72■□□□□ 0.75
HOXC6-201ENST00000243108 A0A1W2PQ27 194 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 A0A1W2PQ64 194 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 A0A1W2PQD8 194 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 CSF2RAP15509 400 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 ME1P48163 572 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 STK38Q15208 465 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 ADALQ6DHV7 355 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 VSIG10LQ86VR7 867 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 FCHSD1Q86WN1 690 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 AFG1LQ8WV93 481 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 MTG1Q9BT17 334 aaPredicted RBP19.71■□□□□ 0.75
HOXC6-201ENST00000243108 TRMT13Q9NUP7 481 aaKnown RBP19.71■□□□□ 0.75
HOXC6-201ENST00000243108 PCDHA7Q9UN72 937 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 GCOM1H8Y6P7 765 aaPredicted RBP19.71■□□□□ 0.75
HOXC6-201ENST00000243108 SPTLC2O15270 562 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 TLR3O15455 904 aaKnown RBP19.71■□□□□ 0.75
HOXC6-201ENST00000243108 POLR2MP0CAP2 368 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 MYCLP12524 364 aaPredicted RBP19.71■□□□□ 0.75
HOXC6-201ENST00000243108 SMARCA1P28370 1054 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 KIF5BP33176 963 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 GNL2Q13823 731 aaKnown RBP19.71■□□□□ 0.75
HOXC6-201ENST00000243108 NBPF20Q3BBV1 942 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 NOSTRINQ8IVI9 506 aa19.71■□□□□ 0.75
HOXC6-201ENST00000243108 DIS3L2Q8IYB7 885 aaKnown RBP19.71■□□□□ 0.75
HOXC6-201ENST00000243108 CHD9Q3L8U1 2897 aa19.7■□□□□ 0.74
HOXC6-201ENST00000243108 DOCK5Q9H7D0 1870 aa19.7■□□□□ 0.74
HOXC6-201ENST00000243108 SLC39A14Q15043 492 aa19.7■□□□□ 0.74
HOXC6-201ENST00000243108 SAMD3Q8N6K7 520 aa19.7■□□□□ 0.74
HOXC6-201ENST00000243108 ENGASEQ8NFI3 743 aa19.7■□□□□ 0.74
HOXC6-201ENST00000243108 GPKOWQ92917 476 aaPredicted RBP eCLIP19.7■□□□□ 0.74
HOXC6-201ENST00000243108 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.7■□□□□ 0.74
HOXC6-201ENST00000243108 GOLPH3LQ9H4A5 285 aa19.7■□□□□ 0.74
HOXC6-201ENST00000243108 KCNJ14Q9UNX9 436 aa19.7■□□□□ 0.74
HOXC6-201ENST00000243108 A0A0C4DFX4 3053 aa19.7■□□□□ 0.74
HOXC6-201ENST00000243108 hCG_1642624A0A1W2PR95 340 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 BTBD18B2RXH4 712 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 GH1P01241 217 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 MMP3P08254 477 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 XBP1P17861 261 aa19.69■□□□□ 0.74
HOXC6-201ENST00000243108 SP2Q02086 613 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms