RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 BBXQ8WY36 941 aaPredicted RBP15.04■□□□□ -0
SIX4-201ENST00000216513 NSUN4Q96CB9 384 aaKnown RBP15.04■□□□□ -0
SIX4-201ENST00000216513 ERO1AQ96HE7 468 aa15.04■□□□□ -0
SIX4-201ENST00000216513 LRRC4Q9HBW1 653 aa15.04■□□□□ -0
SIX4-201ENST00000216513 CPB1P15086 417 aa15.03■□□□□ -0
SIX4-201ENST00000216513 MTX1Q13505 466 aa15.03■□□□□ -0
SIX4-201ENST00000216513 IGSF22Q8N9C0 903 aa15.03■□□□□ -0
SIX4-201ENST00000216513 OR6B3Q8NGW1 331 aa15.03■□□□□ -0
SIX4-201ENST00000216513 POLRMTO00411 1230 aaKnown RBP15.03■□□□□ -0
SIX4-201ENST00000216513 SLC4A1P02730 911 aa15.03■□□□□ -0
SIX4-201ENST00000216513 ATP2A2P16615 1042 aaKnown RBP15.03■□□□□ -0
SIX4-201ENST00000216513 QRICH1Q2TAL8 776 aa15.03■□□□□ -0
SIX4-201ENST00000216513 NEDD4P46934 1319 aa15.03■□□□□ -0
SIX4-201ENST00000216513 GOLGA8IPA6NC78 632 aa15.03■□□□□ -0
SIX4-201ENST00000216513 GOLGA8JA6NMD2 632 aa15.03■□□□□ -0
SIX4-201ENST00000216513 SFI1A8K8P3 1242 aa15.03■□□□□ -0
SIX4-201ENST00000216513 WDR64B1ANS9 1081 aa15.03■□□□□ -0
SIX4-201ENST00000216513 CD58P19256 250 aa15.03■□□□□ -0
SIX4-201ENST00000216513 CKAP4Q07065 602 aaKnown RBP15.03■□□□□ -0
SIX4-201ENST00000216513 PLEKHH3Q7Z736 793 aa15.03■□□□□ -0
SIX4-201ENST00000216513 GIMAP7Q8NHV1 300 aa15.03■□□□□ -0
SIX4-201ENST00000216513 LARP4BQ92615 738 aaKnown RBP15.03■□□□□ -0
SIX4-201ENST00000216513 FDX1P10109 184 aa15.03■□□□□ -0
SIX4-201ENST00000216513 LRRC41Q15345 812 aa15.03■□□□□ -0
SIX4-201ENST00000216513 LPAR1Q92633 364 aa15.03■□□□□ -0
SIX4-201ENST00000216513 FRMPD1Q5SYB0 1578 aa15.03■□□□□ -0
SIX4-201ENST00000216513 MANSC4A6NHS7 340 aaPredicted RBP15.03■□□□□ -0
SIX4-201ENST00000216513 SLU7O95391 586 aaKnown RBP15.03■□□□□ -0
SIX4-201ENST00000216513 LAMC1P11047 1609 aa15.03■□□□□ -0
SIX4-201ENST00000216513 TRIM28Q13263 835 aaKnown RBP15.03■□□□□ -0
SIX4-201ENST00000216513 ADCK5Q3MIX3 580 aa15.03■□□□□ -0
SIX4-201ENST00000216513 CYFIP1Q7L576 1253 aa15.03■□□□□ -0
SIX4-201ENST00000216513 CEP112Q8N8E3 955 aa15.03■□□□□ -0
SIX4-201ENST00000216513 SKA2Q8WVK7 121 aaPredicted RBP15.03■□□□□ -0
SIX4-201ENST00000216513 MOSPD1Q9UJG1 213 aa15.03■□□□□ -0
SIX4-201ENST00000216513 CPSF3Q9UKF6 684 aaKnown RBP15.03■□□□□ -0
SIX4-201ENST00000216513 GH1P01241 217 aa15.02■□□□□ -0
SIX4-201ENST00000216513 MCM3P25205 808 aa15.02■□□□□ -0
SIX4-201ENST00000216513 KLRK1P26718 216 aa15.02■□□□□ -0
SIX4-201ENST00000216513 PDE6CP51160 858 aa15.02■□□□□ -0
SIX4-201ENST00000216513 KLHL30Q0D2K2 578 aa15.02■□□□□ -0
SIX4-201ENST00000216513 PPFIA1Q13136 1202 aa15.02■□□□□ -0
SIX4-201ENST00000216513 GLYCTKQ8IVS8 523 aa15.02■□□□□ -0
SIX4-201ENST00000216513 TM6SF1Q9BZW5 370 aa15.02■□□□□ -0
SIX4-201ENST00000216513 TOPORSQ9NS56 1045 aaPredicted RBP15.02■□□□□ -0
SIX4-201ENST00000216513 FAM184BQ9ULE4 1060 aa15.02■□□□□ -0
SIX4-201ENST00000216513 GNA14O95837 355 aa15.02■□□□□ -0
SIX4-201ENST00000216513 BAG1Q99933 345 aaPredicted RBP15.02■□□□□ -0
SIX4-201ENST00000216513 SYT17Q9BSW7 474 aa15.02■□□□□ -0
SIX4-201ENST00000216513 RNF208Q9H0X6 261 aa15.02■□□□□ -0
SIX4-201ENST00000216513 MYBP10242 640 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 CHADLQ6NUI6 762 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 SIX6OS1Q8N1H7 587 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 TTC30BQ8N4P2 665 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.02□□□□□ -0.01
SIX4-201ENST00000216513 MAP4K1Q92918 833 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 DESI2Q9BSY9 194 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 N4BP1O75113 896 aaKnown RBP15.02□□□□□ -0.01
SIX4-201ENST00000216513 SLC25A27O95847 323 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 MAPK6Q16659 721 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 MTRQ99707 1265 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 GGPS1O95749 300 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 TNFAIP2Q03169 654 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 ZNF568Q3ZCX4 644 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 KLHL7Q8IXQ5 586 aa15.02□□□□□ -0.01
SIX4-201ENST00000216513 PIN4Q9Y237 131 aaKnown RBP15.02□□□□□ -0.01
SIX4-201ENST00000216513 THAP12O43422 761 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 CD2BP2O95400 341 aaKnown RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 LONP1P36776 959 aaKnown RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 PPP2R3AQ06190 1150 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 PSPC1Q8WXF1 523 aaKnown RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 ZSWIM6Q9HCJ5 1215 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 CDC25AP30304 524 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 RNF219Q5W0B1 726 aaPredicted RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 ARRDC4Q8NCT1 418 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 CCT6BQ92526 530 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 LSG1Q9H089 658 aaKnown RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 ZKSCAN5Q9Y2L8 839 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 PDHXO00330 501 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 TSPY1Q01534 308 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 AP3B2Q13367 1082 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 UVSSAQ2YD98 709 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 TTBK2Q6IQ55 1244 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 USP50Q70EL3 339 aaPredicted RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 TBC1D10CQ8IV04 446 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 MB21D1Q8N884 522 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 HEXIM2Q96MH2 286 aaKnown RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 TMEM260Q9NX78 707 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 MAGED2Q9UNF1 606 aaPredicted RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 ABCB4P21439 1286 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 MYL7Q01449 175 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 NR5A1Q13285 461 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
SIX4-201ENST00000216513 TBC1D22BQ9NU19 505 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 FZD1Q9UP38 647 aa15.01□□□□□ -0.01
SIX4-201ENST00000216513 GAP43P17677 238 aa15□□□□□ -0.01
SIX4-201ENST00000216513 CC2D1AQ6P1N0 951 aaPredicted RBP15□□□□□ -0.01
SIX4-201ENST00000216513 CAPN12Q6ZSI9 719 aa15□□□□□ -0.01
SIX4-201ENST00000216513 CSRNP2Q9H175 543 aa15□□□□□ -0.01
SIX4-201ENST00000216513 RPAP1Q9BWH6 1393 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms