RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 IGLV3-22A0A075B6J6 115 aa28.94■■■□□ 2.22
RTN4R-201ENST00000043402 FRMD3A2A2Y4 597 aa28.94■■■□□ 2.22
RTN4R-201ENST00000043402 CFBP00751 764 aa28.94■■■□□ 2.22
RTN4R-201ENST00000043402 TSR1Q2NL82 804 aaKnown RBP28.94■■■□□ 2.22
RTN4R-201ENST00000043402 TSG101Q99816 390 aa28.94■■■□□ 2.22
RTN4R-201ENST00000043402 SHTN1A0MZ66 631 aa28.93■■■□□ 2.22
RTN4R-201ENST00000043402 EFCAB8A8MWE9 144 aa28.93■■■□□ 2.22
RTN4R-201ENST00000043402 WNT10BO00744 389 aa28.93■■■□□ 2.22
RTN4R-201ENST00000043402 HERC4Q5GLZ8 1057 aaPredicted RBP28.93■■■□□ 2.22
RTN4R-201ENST00000043402 CCDC84Q86UT8 332 aaPredicted RBP28.93■■■□□ 2.22
RTN4R-201ENST00000043402 UBXN4Q92575 508 aa28.93■■■□□ 2.22
RTN4R-201ENST00000043402 SCAF8Q9UPN6 1271 aaKnown RBP28.93■■■□□ 2.22
RTN4R-201ENST00000043402 A0A1W2PQJ5 194 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 BAG6P46379 1132 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 PPP2R3AQ06190 1150 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 KIF4BQ2VIQ3 1234 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 SLC35F6Q8N357 371 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 ERMNQ8TAM6 284 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 EPHB6O15197 1021 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 H2AFXP16104 143 aaPredicted RBP28.92■■■□□ 2.22
RTN4R-201ENST00000043402 ZNF76P36508 570 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 CHURC1Q8WUH1 139 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 SCFD1Q8WVM8 642 aa28.92■■■□□ 2.22
RTN4R-201ENST00000043402 HERVK_113P62684 666 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 PABPC4Q13310 644 aaKnown RBP eCLIP28.91■■■□□ 2.22
RTN4R-201ENST00000043402 WDR18Q9BV38 432 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 FBXO28Q9NVF7 368 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 TRIM10Q9UDY6 481 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 PITPNM2Q9BZ72 1349 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 EML1O00423 815 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 FKBP3Q00688 224 aaKnown RBP28.91■■■□□ 2.22
RTN4R-201ENST00000043402 SLC30A10Q6XR72 485 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 NELFCDQ8IXH7 590 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 SYT2Q8N9I0 419 aaPredicted RBP28.91■■■□□ 2.22
RTN4R-201ENST00000043402 SLC16A10Q8TF71 515 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 DNM3Q9UQ16 869 aa28.91■■■□□ 2.22
RTN4R-201ENST00000043402 SPDYE4A6NLX3 237 aa28.9■■■□□ 2.22
RTN4R-201ENST00000043402 GIT2Q14161 759 aa28.9■■■□□ 2.22
RTN4R-201ENST00000043402 TRAF5O00463 557 aa28.89■■■□□ 2.22
RTN4R-201ENST00000043402 KRT18P05783 430 aaKnown RBP28.89■■■□□ 2.22
RTN4R-201ENST00000043402 MAP3K10Q02779 954 aa28.89■■■□□ 2.22
RTN4R-201ENST00000043402 CYP4A11Q02928 519 aa28.89■■■□□ 2.22
RTN4R-201ENST00000043402 KCTD10Q9H3F6 313 aa28.89■■■□□ 2.22
RTN4R-201ENST00000043402 TFR2Q9UP52 801 aa28.89■■■□□ 2.22
RTN4R-201ENST00000043402 TRAF1Q13077 416 aa28.89■■■□□ 2.22
RTN4R-201ENST00000043402 NHEJ1Q9H9Q4 299 aaPredicted RBP28.89■■■□□ 2.22
RTN4R-201ENST00000043402 FAM207AQ9NSI2 230 aaPredicted RBP28.89■■■□□ 2.22
RTN4R-201ENST00000043402 EMILIN3Q9NT22 766 aa28.89■■■□□ 2.22
RTN4R-201ENST00000043402 COL4A3BPQ9Y5P4 624 aa28.89■■■□□ 2.22
RTN4R-201ENST00000043402 GCOM1H8Y6P7 765 aaPredicted RBP28.88■■■□□ 2.21
RTN4R-201ENST00000043402 PLA2G6O60733 806 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 POLR2MP0CAP2 368 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 SF3B2Q13435 895 aaKnown RBP28.88■■■□□ 2.21
RTN4R-201ENST00000043402 SAMD1Q6SPF0 538 aaPredicted RBP28.88■■■□□ 2.21
RTN4R-201ENST00000043402 CCDC155Q8N6L0 562 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 EIF2AK1Q9BQI3 630 aaKnown RBP28.88■■■□□ 2.21
RTN4R-201ENST00000043402 ZHX3Q9H4I2 956 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 ZNHIT6Q9NWK9 470 aaKnown RBP28.88■■■□□ 2.21
RTN4R-201ENST00000043402 CASP5P51878 434 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 UBXN2AP68543 259 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 FEZ1Q99689 392 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 RGL1Q9NZL6 768 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 PIM2Q9P1W9 311 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 MYO1AQ9UBC5 1043 aa28.88■■■□□ 2.21
RTN4R-201ENST00000043402 RSRC2Q7L4I2 434 aaKnown RBP28.87■■■□□ 2.21
RTN4R-201ENST00000043402 REEP2Q9BRK0 252 aa28.87■■■□□ 2.21
RTN4R-201ENST00000043402 MYOZ2Q9NPC6 264 aa28.87■■■□□ 2.21
RTN4R-201ENST00000043402 CTAGE9A4FU28 777 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 CBX1P83916 185 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 TEX2Q8IWB9 1127 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 POLR3CQ9BUI4 534 aaPredicted RBP28.86■■■□□ 2.21
RTN4R-201ENST00000043402 EPC1Q9H2F5 836 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 MMRN2Q9H8L6 949 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 ZNF446Q9NWS9 450 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 GUCA1BQ9UMX6 200 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 CDK17Q00537 523 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 CIAPIN1Q6FI81 312 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 OTOP1Q7RTM1 612 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 FAM160B2Q86V87 743 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 IQCDQ96DY2 449 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 ZMYND15Q9H091 742 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 SH2D4AQ9H788 454 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 DDX41Q9UJV9 622 aaKnown RBP28.86■■■□□ 2.21
RTN4R-201ENST00000043402 CDC23Q9UJX2 597 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 PLAGL2Q9UPG8 496 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 STK24Q9Y6E0 443 aa28.86■■■□□ 2.21
RTN4R-201ENST00000043402 ASNSP08243 561 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 HNRNPH3P31942 346 aaKnown RBP28.85■■■□□ 2.21
RTN4R-201ENST00000043402 KCNMA1Q12791 1236 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 LDHDQ86WU2 507 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 CCDC170Q8IYT3 715 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 ZFP91Q96JP5 570 aaPredicted RBP28.85■■■□□ 2.21
RTN4R-201ENST00000043402 CEP63Q96MT8 703 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 HAUS4Q9H6D7 363 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 FEM1BQ9UK73 627 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 MRPL11Q9Y3B7 192 aaKnown RBP28.85■■■□□ 2.21
RTN4R-201ENST00000043402 PHF20L1A8MW92 1017 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 EGFRP00533 1210 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 BHMT2Q9H2M3 363 aa28.85■■■□□ 2.21
RTN4R-201ENST00000043402 PSMD10O75832 226 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms