RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 FAM83AQ86UY5 434 aa19.91■□□□□ 0.78
PHGDH-226ENST00000641756 ZBED3Q96IU2 234 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-226ENST00000641756 ARID3AQ99856 593 aa19.91■□□□□ 0.78
PHGDH-226ENST00000641756 PDCL3Q9H2J4 239 aa19.91■□□□□ 0.78
PHGDH-226ENST00000641756 PPP1R1BQ9UD71 204 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-226ENST00000641756 A0A1W2PQC6 194 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 POTEFA5A3E0 1075 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 POTEIP0CG38 1075 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 FECHP22830 423 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 DNM2P50570 870 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 RAD51AP2Q09MP3 1159 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 POTEGQ6S5H5 508 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 POTEEQ6S8J3 1075 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 GUF1Q8N442 669 aaKnown RBP19.9■□□□□ 0.78
PHGDH-226ENST00000641756 WDR24Q96S15 920 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 NOC4LQ9BVI4 516 aaKnown RBP19.9■□□□□ 0.78
PHGDH-226ENST00000641756 MYOZ2Q9NPC6 264 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 PANK4Q9NVE7 773 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 TBC1D7Q9P0N9 293 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 PGAP2Q9UHJ9 254 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 ZNF76P36508 570 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 KLK7P49862 253 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 DALRD3Q5D0E6 543 aaKnown RBP19.9■□□□□ 0.78
PHGDH-226ENST00000641756 GPBP1Q86WP2 473 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 TAOK3Q9H2K8 898 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 LZTFL1Q9NQ48 299 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 FBXO28Q9NVF7 368 aa19.9■□□□□ 0.78
PHGDH-226ENST00000641756 MSH4O15457 936 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 TGFB2P61812 414 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 TBC1D8BQ0IIM8 1120 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 SYCP1Q15431 976 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 MIIPQ5JXC2 388 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 CATSPER3Q86XQ3 398 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 LRRN4CLQ8ND94 238 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 ACRBPQ8NEB7 543 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 JDP2Q8WYK2 163 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 MAP7D2Q96T17 732 aa19.89■□□□□ 0.77
PHGDH-226ENST00000641756 RANBP17Q9H2T7 1088 aaKnown RBP19.89■□□□□ 0.77
PHGDH-226ENST00000641756 BMP2KQ9NSY1 1161 aaPredicted RBP19.89■□□□□ 0.77
PHGDH-226ENST00000641756 PIK3CDO00329 1044 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 MEIS1O00470 390 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 TBX3O15119 743 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 EGFRP00533 1210 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 PSMD2Q13200 908 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 TMTC1Q8IUR5 882 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 CHURC1Q8WUH1 139 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 ERO1AQ96HE7 468 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 FGFBP2Q9BYJ0 223 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 IRX2Q9BZI1 471 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-226ENST00000641756 URI1O94763 535 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-226ENST00000641756 CIITAP33076 1130 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 UBXN2AP68543 259 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 HAUS3Q68CZ6 603 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 CYP26C1Q6V0L0 522 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 MTERF4Q7Z6M4 381 aaKnown RBP19.88■□□□□ 0.77
PHGDH-226ENST00000641756 CHP1Q99653 195 aa19.88■□□□□ 0.77
PHGDH-226ENST00000641756 CYP11B2P19099 503 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 CASQ1P31415 396 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 PSMC6P62333 389 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 RASA3Q14644 834 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 FAM26FQ5R3K3 315 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 SLC30A10Q6XR72 485 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 PCMTD1Q96MG8 357 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-226ENST00000641756 LUC7L2Q9Y383 392 aaKnown RBP19.87■□□□□ 0.77
PHGDH-226ENST00000641756 RASSF10A6NK89 507 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 ERCC3P19447 782 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 MYOCDQ8IZQ8 938 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 ERMNQ8TAM6 284 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 FAM20AQ96MK3 541 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 SH2D4AQ9H788 454 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 CAPN11Q9UMQ6 739 aa19.87■□□□□ 0.77
PHGDH-226ENST00000641756 GCOM1H8Y6P7 765 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-226ENST00000641756 NFKBIEO00221 500 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 KRT18P05783 430 aaKnown RBP19.86■□□□□ 0.77
PHGDH-226ENST00000641756 CYP3A4P08684 503 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 POLR2MP0CAP2 368 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 SLC12A3P55017 1021 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 CCDC65Q8IXS2 484 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 PDCL2Q8N4E4 241 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 OR8K1Q8NGG5 319 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 ZFP91Q96JP5 570 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-226ENST00000641756 FEZ1Q99689 392 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 ZNF341Q9BYN7 854 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 VAV3Q9UKW4 847 aa19.86■□□□□ 0.77
PHGDH-226ENST00000641756 ASNSP08243 561 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 TRIM21P19474 475 aaKnown RBP19.85■□□□□ 0.77
PHGDH-226ENST00000641756 CYP4A11Q02928 519 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 LRRC63Q05C16 580 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 PABPC4Q13310 644 aaKnown RBP eCLIP19.85■□□□□ 0.779e-7■■■■□ 21.6
PHGDH-226ENST00000641756 ARSHQ5FYA8 562 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 HERC4Q5GLZ8 1057 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-226ENST00000641756 TSG101Q99816 390 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 SLF1Q9BQI6 1058 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 WDR18Q9BV38 432 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 ZHX3Q9H4I2 956 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 AGPAT5Q9NUQ2 364 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 FER1L6Q2WGJ9 1857 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 IGLV3-22A0A075B6J6 115 aa19.85■□□□□ 0.77
PHGDH-226ENST00000641756 SLC26A4O43511 780 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms