RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 LRRC63Q05C16 580 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 KCNMA1Q12791 1236 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 MICALCLQ6ZW33 695 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 KRT25Q7Z3Z0 450 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 FBXO33Q7Z6M2 555 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 WHAMMQ8TF30 809 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 CABS1Q96KC9 395 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 TAF1P21675 1872 aa15.11■□□□□ 0.01
PAX6-280ENST00000640872 TLR2O60603 784 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 PALMO75781 387 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 MYBP10242 640 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 MDH1P40925 334 aaKnown RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 GUCY2FP51841 1108 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 GRB10Q13322 594 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 NONOQ15233 471 aaKnown RBP eCLIP15.1■□□□□ 0.01
PAX6-280ENST00000640872 SV2BQ7L1I2 683 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 CACNA2D4Q7Z3S7 1137 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 NLRP14Q86W24 1093 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 AMIGO3Q86WK7 504 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 MYCBPAPQ8TBZ2 947 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 GGA2Q9UJY4 613 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 PALM3A6NDB9 673 aaPredicted RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 HMGB1P1B2RPK0 211 aaPredicted RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 USP17L8P0C7I0 530 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 HSPA9P38646 679 aaKnown RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 NT5C2P49902 561 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 DDR1Q08345 913 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 ITGB3BPQ13352 177 aaPredicted RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 NAB2Q15742 525 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 CDC37Q16543 378 aaPredicted RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 MEI1Q5TIA1 1274 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 CCDC24Q8N4L8 307 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 SYN2Q92777 582 aaPredicted RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 CALML4Q96GE6 196 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 KRT12Q99456 494 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 BSDC1Q9NW68 430 aaPredicted RBP15.1■□□□□ 0.01
PAX6-280ENST00000640872 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 MINPP1Q9UNW1 487 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 PCDHGC5Q9Y5F6 944 aa15.1■□□□□ 0.01
PAX6-280ENST00000640872 FTCDO95954 541 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 KLRK1P26718 216 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 TRADDQ15628 312 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 TDRD12Q587J7 1177 aaKnown RBP15.09■□□□□ 0.01
PAX6-280ENST00000640872 FOXR2Q6PJQ5 311 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 NEK8Q86SG6 692 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 PNMA5Q96PV4 448 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 CCT8L2Q96SF2 557 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 A1CFQ9NQ94 594 aaKnown RBP15.09■□□□□ 0.01
PAX6-280ENST00000640872 CEP72Q9P209 647 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 STK17AQ9UEE5 414 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 NOL4O94818 638 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 SERPING1P05155 500 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 PRDX5P30044 214 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 SEC24CP53992 1094 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 HDLBPQ00341 1268 aaKnown RBP15.09■□□□□ 0.01
PAX6-280ENST00000640872 SLC4A8Q2Y0W8 1093 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 SLC9C1Q4G0N8 1177 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 C12orf60Q5U649 245 aa15.09■□□□□ 0.01
PAX6-280ENST00000640872 USP17L3A6NCW0 530 aa15.08■□□□□ 0
PAX6-280ENST00000640872 USP17L4A6NCW7 530 aa15.08■□□□□ 0
PAX6-280ENST00000640872 H0YHG0 523 aa15.08■□□□□ 0
PAX6-280ENST00000640872 RAD51CO43502 376 aa15.08■□□□□ 0
PAX6-280ENST00000640872 FAM107AO95990 144 aa15.08■□□□□ 0
PAX6-280ENST00000640872 KLRC1P26715 233 aa15.08■□□□□ 0
PAX6-280ENST00000640872 EHHADHQ08426 723 aa15.08■□□□□ 0
PAX6-280ENST00000640872 USP17L1Q7RTZ2 530 aa15.08■□□□□ 0
PAX6-280ENST00000640872 NUCKS1Q9H1E3 243 aaKnown RBP15.08■□□□□ 0
PAX6-280ENST00000640872 VCPKMTQ9H867 229 aa15.08■□□□□ 0
PAX6-280ENST00000640872 TMBIM4Q9HC24 238 aa15.08■□□□□ 0
PAX6-280ENST00000640872 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0
PAX6-280ENST00000640872 TMEM59LQ9UK28 342 aa15.08■□□□□ 0
PAX6-280ENST00000640872 PLAAQ9Y263 795 aa15.08■□□□□ 0
PAX6-280ENST00000640872 ROBO3Q96MS0 1386 aa15.08■□□□□ 0
PAX6-280ENST00000640872 NAPAP54920 295 aa15.07■□□□□ 0
PAX6-280ENST00000640872 ACTN3Q08043 901 aaPredicted RBP15.07■□□□□ 0
PAX6-280ENST00000640872 ORC2Q13416 577 aaPredicted RBP15.07■□□□□ 0
PAX6-280ENST00000640872 SFMBT2Q5VUG0 894 aa15.07■□□□□ 0
PAX6-280ENST00000640872 PPP4R3AQ6IN85 833 aa15.07■□□□□ 0
PAX6-280ENST00000640872 C6orf89Q6UWU4 347 aa15.07■□□□□ 0
PAX6-280ENST00000640872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.07■□□□□ 0
PAX6-280ENST00000640872 LARP4BQ92615 738 aaKnown RBP15.07■□□□□ 0
PAX6-280ENST00000640872 DYNLL2Q96FJ2 89 aa15.07■□□□□ 0
PAX6-280ENST00000640872 PLCB1Q9NQ66 1216 aa15.07■□□□□ 0
PAX6-280ENST00000640872 SRP68Q9UHB9 627 aaKnown RBP15.07■□□□□ 0
PAX6-280ENST00000640872 CCDC88AQ3V6T2 1871 aa15.07■□□□□ 0
PAX6-280ENST00000640872 ZPR1O75312 459 aa15.07■□□□□ 0
PAX6-280ENST00000640872 ERCC3P19447 782 aa15.07■□□□□ 0
PAX6-280ENST00000640872 ECHS1P30084 290 aa15.07■□□□□ 0
PAX6-280ENST00000640872 DNA2P51530 1060 aa15.07■□□□□ 0
PAX6-280ENST00000640872 PLCB4Q15147 1175 aa15.07■□□□□ 0
PAX6-280ENST00000640872 CEP85LQ5SZL2 805 aa15.07■□□□□ 0
PAX6-280ENST00000640872 FAM83BQ5T0W9 1011 aa15.07■□□□□ 0
PAX6-280ENST00000640872 TBC1D9BQ66K14 1250 aa15.07■□□□□ 0
PAX6-280ENST00000640872 LRIG3Q6UXM1 1119 aa15.07■□□□□ 0
PAX6-280ENST00000640872 DYMQ7RTS9 669 aa15.07■□□□□ 0
PAX6-280ENST00000640872 EIF1ADQ8N9N8 165 aaKnown RBP15.07■□□□□ 0
PAX6-280ENST00000640872 USP38Q8NB14 1042 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms