RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 HOXA13P31271 388 aaPredicted RBP23.94■■□□□ 1.42
CLN6-224ENST00000638076 TSR1Q2NL82 804 aaKnown RBP23.94■■□□□ 1.42
CLN6-224ENST00000638076 VEZTQ9HBM0 779 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 CNTNAP1P78357 1384 aa23.94■■□□□ 1.42
CLN6-224ENST00000638076 FAM86B1E9PN63 330 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 MED24O75448 989 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 FAM86B2P0C5J1 330 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 KCNA3P22001 575 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 SPDYE2Q495Y8 402 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 FBXO38Q6PIJ6 1188 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 LENG9Q96B70 501 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 PCMTD1Q96MG8 357 aaPredicted RBP23.93■■□□□ 1.42
CLN6-224ENST00000638076 EPN1Q9Y6I3 576 aaPredicted RBP23.93■■□□□ 1.42
CLN6-224ENST00000638076 FGFR1OPO95684 399 aaKnown RBP23.93■■□□□ 1.42
CLN6-224ENST00000638076 SPIRE1Q08AE8 756 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 FKBP15Q5T1M5 1219 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 WDR59Q6PJI9 974 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 RETREG2Q8NC44 543 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 ERGIC2Q96RQ1 377 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 TMX2Q9Y320 296 aa23.93■■□□□ 1.42
CLN6-224ENST00000638076 TBX3O15119 743 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 SLC26A4O43511 780 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 NDUFA10O95299 355 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 ABL1P00519 1130 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 ZNF569Q5MCW4 686 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 HAUS3Q68CZ6 603 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 MYOCDQ8IZQ8 938 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 GOPCQ9HD26 462 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 ZBTB21Q9ULJ3 1066 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 TADA3O75528 432 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 FAM26FQ5R3K3 315 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 FAM83BQ5T0W9 1011 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 GPBP1Q86WP2 473 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 UBXN4Q92575 508 aa23.92■■□□□ 1.42
CLN6-224ENST00000638076 VWA3BQ502W6 1294 aa23.91■■□□□ 1.42
CLN6-224ENST00000638076 NCAPH2Q6IBW4 605 aa23.91■■□□□ 1.42
CLN6-224ENST00000638076 LRRC55Q6ZSA7 311 aa23.91■■□□□ 1.42
CLN6-224ENST00000638076 CDAN1Q8IWY9 1227 aa23.91■■□□□ 1.42
CLN6-224ENST00000638076 TSG101Q99816 390 aa23.91■■□□□ 1.42
CLN6-224ENST00000638076 NPHP3-ACAD11A0A0J9YXS1 232 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 POTEFA5A3E0 1075 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 EFCAB8A8MWE9 144 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 POTEIP0CG38 1075 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 POTEGQ6S5H5 508 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 POTEEQ6S8J3 1075 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 TMEM39BQ9GZU3 492 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 TBC1D7Q9P0N9 293 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 CYP11B2P19099 503 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 CIITAP33076 1130 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 ARHGAP25P42331 645 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 CACNB1Q02641 598 aaPredicted RBP23.9■■□□□ 1.42
CLN6-224ENST00000638076 MEA1Q16626 185 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 CATSPER3Q86XQ3 398 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 CCDC65Q8IXS2 484 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 NDST4Q9H3R1 872 aa23.9■■□□□ 1.42
CLN6-224ENST00000638076 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.9■■□□□ 1.42
CLN6-224ENST00000638076 REXO2Q9Y3B8 237 aaKnown RBP23.9■■□□□ 1.42
CLN6-224ENST00000638076 PIK3CDO00329 1044 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 ZBED6P86452 979 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 PPP2R3AQ06190 1150 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 RAD51AP2Q09MP3 1159 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 MAN2A1Q16706 1144 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 GLIPR1L2Q4G1C9 344 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 MIGA2Q7L4E1 593 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 FAM20AQ96MK3 541 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 FGFBP2Q9BYJ0 223 aa23.89■■□□□ 1.42
CLN6-224ENST00000638076 ABCB11O95342 1321 aa23.89■■□□□ 1.41
CLN6-224ENST00000638076 MSH4O15457 936 aa23.89■■□□□ 1.41
CLN6-224ENST00000638076 ERMNQ8TAM6 284 aa23.89■■□□□ 1.41
CLN6-224ENST00000638076 CYP2W1Q8TAV3 490 aa23.89■■□□□ 1.41
CLN6-224ENST00000638076 SPDYE4A6NLX3 237 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 SLC12A3P55017 1021 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 FIGNQ5HY92 759 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 FOXR2Q6PJQ5 311 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 SLC35F6Q8N357 371 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 ZNHIT6Q9NWK9 470 aaKnown RBP23.88■■□□□ 1.41
CLN6-224ENST00000638076 ZNRF3Q9ULT6 936 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 PCDHA2Q9Y5H9 948 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 ZNF76P36508 570 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 ZYXQ15942 572 aaKnown RBP23.88■■□□□ 1.41
CLN6-224ENST00000638076 ZCWPW2Q504Y3 356 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 HERC4Q5GLZ8 1057 aaPredicted RBP23.88■■□□□ 1.41
CLN6-224ENST00000638076 CCDC174Q6PII3 467 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 NIM1KQ8IY84 436 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 FEZ1Q99689 392 aa23.88■■□□□ 1.41
CLN6-224ENST00000638076 A0A1W2PQJ5 194 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 KRT18P05783 430 aaKnown RBP23.87■■□□□ 1.41
CLN6-224ENST00000638076 CYP3A4P08684 503 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 ERCC3P19447 782 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 RPA1P27694 616 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 ARSHQ5FYA8 562 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 MEIS1O00470 390 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 CFBP00751 764 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 SPATA31C1P0DKV0 1188 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 H2AFXP16104 143 aaPredicted RBP23.87■■□□□ 1.41
CLN6-224ENST00000638076 PSMC6P62333 389 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 FKBP1CQ5VVH2 108 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 DEFB132Q7Z7B7 95 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 AGBL3Q8NEM8 1001 aa23.87■■□□□ 1.41
CLN6-224ENST00000638076 TBC1D12O60347 775 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms