RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 LENG1Q96BZ8 264 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-235ENST00000628566 INPP4AQ96PE3 977 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-235ENST00000628566 KIF2CQ99661 725 aa8.9□□□□□ -0.98
NR1I3-235ENST00000628566 NAP1L4Q99733 375 aaKnown RBP8.9□□□□□ -0.98
NR1I3-235ENST00000628566 SENP7Q9BQF6 1050 aa8.9□□□□□ -0.98
NR1I3-235ENST00000628566 SDF4Q9BRK5 362 aa8.9□□□□□ -0.98
NR1I3-235ENST00000628566 ALG1Q9BT22 464 aa8.9□□□□□ -0.98
NR1I3-235ENST00000628566 KATNAL1Q9BW62 490 aa8.9□□□□□ -0.98
NR1I3-235ENST00000628566 RTEL1Q9NZ71 1219 aa8.9□□□□□ -0.98
NR1I3-235ENST00000628566 DDX41Q9UJV9 622 aaKnown RBP8.9□□□□□ -0.98
NR1I3-235ENST00000628566 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-235ENST00000628566 KIAA0100Q14667 2235 aaKnown RBP8.89□□□□□ -0.99
NR1I3-235ENST00000628566 A0A0U1RQG5 324 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-235ENST00000628566 A6NJR5 290 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 DCDC2CA8MYV0 355 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 SPATA31C2B4DYI2 1134 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 PPFIA3O75145 1194 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 GGPS1O95749 300 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 MYL3P08590 195 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 ATN1P54259 1190 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-235ENST00000628566 ARHGAP4P98171 946 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 GNL2Q13823 731 aaKnown RBP8.89□□□□□ -0.99
NR1I3-235ENST00000628566 LY6KQ17RY6 165 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 CEP55Q53EZ4 464 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 C1orf53Q5VUE5 145 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 TYW1BQ6NUM6 668 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 CCDC62Q6P9F0 684 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 SLC39A5Q6ZMH5 540 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 NIPA1Q7RTP0 329 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 DAGLBQ8NCG7 672 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 IL31RAQ8NI17 732 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 PPTC7Q8NI37 304 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 TNPO1Q92973 898 aaKnown RBP8.89□□□□□ -0.99
NR1I3-235ENST00000628566 FERMT2Q96AC1 680 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 SPATA33Q96N06 139 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 MXRA8Q9BRK3 442 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 MTG1Q9BT17 334 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-235ENST00000628566 JADE2Q9NQC1 790 aa8.89□□□□□ -0.99
NR1I3-235ENST00000628566 DDX49Q9Y6V7 483 aaKnown RBP8.89□□□□□ -0.99
NR1I3-235ENST00000628566 KIAA1217Q5T5P2 1943 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 ADCY6O43306 1168 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 PPFIA4O75335 1185 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 CYP3A4P08684 503 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 SUPT20HL2P0C7V6 817 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 UBA1P22314 1058 aaKnown RBP8.88□□□□□ -0.99
NR1I3-235ENST00000628566 KRT2P35908 639 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 USP11P51784 963 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 MRPS9P82933 396 aaKnown RBP8.88□□□□□ -0.99
NR1I3-235ENST00000628566 BEX3Q00994 111 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 NONOQ15233 471 aaKnown RBP eCLIP8.88□□□□□ -0.99
NR1I3-235ENST00000628566 CELF3Q5SZQ8 465 aaKnown RBP8.88□□□□□ -0.99
NR1I3-235ENST00000628566 METTL7BQ6UX53 244 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 NSUN7Q8NE18 718 aaKnown RBP8.88□□□□□ -0.99
NR1I3-235ENST00000628566 C8orf76Q96K31 380 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 PHF20Q9BVI0 1012 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 ZNF215Q9UL58 517 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-235ENST00000628566 ATP11BQ9Y2G3 1177 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 UBIAD1Q9Y5Z9 338 aa8.88□□□□□ -0.99
NR1I3-235ENST00000628566 ARVCFO00192 962 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 MARCH6O60337 910 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 ARIH2O95376 493 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 LARGE1O95461 756 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 CTDNEP1O95476 244 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 MMP3P08254 477 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 GCFC2P16383 781 aaKnown RBP8.87□□□□□ -0.99
NR1I3-235ENST00000628566 MNX1P50219 401 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-235ENST00000628566 RTP1P59025 263 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 PURAQ00577 322 aaKnown RBP8.87□□□□□ -0.99
NR1I3-235ENST00000628566 ARHGAP1Q07960 439 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 MYSM1Q5VVJ2 828 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 CCSAPQ6IQ19 270 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-235ENST00000628566 CXCL17Q6UXB2 119 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 CYFIP1Q7L576 1253 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 PLA2G4DQ86XP0 818 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 C7orf61Q8IZ16 206 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 AFG1LQ8WV93 481 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 PGBD1Q96JS3 809 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 TOX2Q96NM4 488 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 LBHD1Q9BQE6 289 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-235ENST00000628566 TBC1D22BQ9NU19 505 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 TMEM260Q9NX78 707 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 NOD1Q9Y239 953 aa8.87□□□□□ -0.99
NR1I3-235ENST00000628566 NFASCO94856 1347 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 MYADML2A6NDP7 307 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 MEIS1O00470 390 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 JAK2O60674 1132 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 PQBP1O60828 265 aaKnown RBP8.86□□□□□ -0.99
NR1I3-235ENST00000628566 RGS20O76081 388 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 MMP1P03956 469 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 ITGB5P18084 799 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 PTPN11Q06124 597 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-235ENST00000628566 ITGA7Q13683 1181 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 SNX17Q15036 470 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 LRRC26Q2I0M4 334 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 FAM47CQ5HY64 1035 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 PRPF38BQ5VTL8 546 aaKnown RBP8.86□□□□□ -0.99
NR1I3-235ENST00000628566 MOXD1Q6UVY6 613 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 NEK8Q86SG6 692 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 HSCBQ8IWL3 235 aa8.86□□□□□ -0.99
NR1I3-235ENST00000628566 C7orf31Q8N865 590 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms