RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	MMP1	P03956	469 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	TSPY3	P0CV98	308 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	TSPY8	P0CW00	308 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	PSEN2	P49810	448 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	PLEKHG4	Q58EX7	1191 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	EXOC6	Q8TAG9	804 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	TOP1MT	Q969P6	601 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	ALG1	Q9BT22	464 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	IFIH1	Q9BYX4	1025 aa	Known RBP	12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	BOLA2	Q9H3K6	86 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	INCENP	Q9NQS7	918 aa		12.17	□□□□□ -0.46
RRP12-215	ENST00000622320	KIAA1671	Q9BY89	1806 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	KIAA1217	Q5T5P2	1943 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	GSG1L2	A8MUP6	293 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	PDGFB	P01127	241 aa	Predicted RBP	12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	RB1	P06400	928 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	IFIT2	P09913	472 aa	Known RBP	12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	ZNF286B	P0CG31	522 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	CAST	P20810	708 aa	Known RBP	12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	ARHGAP1	Q07960	439 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	ADAM15	Q13444	863 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	GIMAP6	Q6P9H5	292 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	FIBCD1	Q8N539	461 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	NEDD1	Q8NHV4	660 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	NKD2	Q969F2	451 aa	Predicted RBP	12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	KATNAL1	Q9BW62	490 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	RANBP17	Q9H2T7	1088 aa	Known RBP	12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	RWDD3	Q9Y3V2	267 aa		12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	USP15	Q9Y4E8	981 aa	Predicted RBP	12.16	□□□□□ -0.46
RRP12-215	ENST00000622320	ADGRA3	Q8IWK6	1321 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	RSPH10B2	B2RC85	870 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	F2	P00734	622 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	LINC00271	P0C7V0	271 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	RSPH10B	P0C881	870 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	ATP5J	P18859	108 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	ICAM3	P32942	547 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	TDO2	P48775	406 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	ZNF200	P98182	395 aa	Predicted RBP	12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	MFSD10	Q14728	455 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	DGKD	Q16760	1214 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	PTPN21	Q16825	1174 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	KIAA0753	Q2KHM9	967 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	CCDC96	Q2M329	555 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	RCSD1	Q6JBY9	416 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	ZSCAN25	Q6NSZ9	544 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	CCDC62	Q6P9F0	684 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	RNF207	Q6ZRF8	634 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	CHST3	Q7LGC8	479 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	FRMD5	Q7Z6J6	570 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	ADSSL1	Q8N142	457 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	DNER	Q8NFT8	737 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	SEPT8	Q92599	483 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	PPP2R3C	Q969Q6	453 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	STRBP	Q96SI9	672 aa	Known RBP	12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	HAUS7	Q99871	368 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	PHF7	Q9BWX1	381 aa	Predicted RBP	12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	CLEC1B	Q9P126	229 aa		12.15	□□□□□ -0.46
RRP12-215	ENST00000622320	HAS3	O00219	553 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	SMARCA5	O60264	1052 aa	Predicted RBP	12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	BMPR1A	P36894	532 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	THPO	P40225	353 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	RPS6	P62753	249 aa	Known RBP	12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	COASY	Q13057	564 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	LY6K	Q17RY6	165 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	MCTP2	Q6DN12	878 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	SMC5	Q8IY18	1101 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	DHX37	Q8IY37	1157 aa	Known RBP	12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	CLEC4D	Q8WXI8	215 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	IL17RA	Q96F46	866 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	RPGRIP1	Q96KN7	1286 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	BCL11A	Q9H165	835 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	MTMR7	Q9Y216	660 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	EPG5	Q9HCE0	2579 aa		12.14	□□□□□ -0.47
RRP12-215	ENST00000622320	SALL3	Q9BXA9	1300 aa		12.13	□□□□□ -0.47
RRP12-215	ENST00000622320	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.13	□□□□□ -0.47
RRP12-215	ENST00000622320	GLP2R	O95838	553 aa		12.13	□□□□□ -0.47
RRP12-215	ENST00000622320	HIC1	Q14526	733 aa		12.13	□□□□□ -0.47
RRP12-215	ENST00000622320	ADGRD2	Q7Z7M1	963 aa		12.13	□□□□□ -0.47
RRP12-215	ENST00000622320	SERINC5	Q86VE9	423 aa		12.13	□□□□□ -0.47
RRP12-215	ENST00000622320	EFHB	Q8N7U6	833 aa		12.13	□□□□□ -0.47
RRP12-215	ENST00000622320	RIPOR3	Q96MK2	946 aa		12.13	□□□□□ -0.47
RRP12-215	ENST00000622320	STX8	Q9UNK0	236 aa		12.13	□□□□□ -0.47
RRP12-215	ENST00000622320		B4DLN1	442 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	CTSH	P09668	335 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	SLC16A2	P36021	539 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	MRPL12	P52815	198 aa	Known RBP	12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	TFAP4	Q01664	338 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	CAMK1	Q14012	370 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	PPP4R3B	Q5MIZ7	849 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	SYDE2	Q5VT97	1194 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	SEPT14	Q6ZU15	432 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	ZBTB33	Q86T24	672 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	TMEM105	Q8N8V8	129 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	CLP1	Q92989	425 aa	Known RBP	12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	OSBPL7	Q9BZF2	842 aa		12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	RC3H2	Q9HBD1	1191 aa	Known RBP	12.12	□□□□□ -0.47
RRP12-215	ENST00000622320	NCOR2	Q9Y618	2525 aa		12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms