RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 LRRC15Q8TF66 581 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 WDR18Q9BV38 432 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 GOPCQ9HD26 462 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 SYNPO2Q9UMS6 1093 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 MAPK8IP1Q9UQF2 711 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 TMX2Q9Y320 296 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 TRIM49BA6NDI0 452 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 LGALS16A8MUM7 142 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 USP17L10C9JJH3 530 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 PPATQ06203 517 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 SRGAP1Q7Z6B7 1085 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 ACRBPQ8NEB7 543 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 ZNF507Q8TCN5 953 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 CNKSR2Q8WXI2 1034 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 OPTNQ96CV9 577 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 NUP88Q99567 741 aaPredicted RBP19.49■□□□□ 0.71
FAM3A-222ENST00000621967 MYO1AQ9UBC5 1043 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 CDC23Q9UJX2 597 aa19.49■□□□□ 0.71
FAM3A-222ENST00000621967 ABT1Q9ULW3 272 aaKnown RBP19.49■□□□□ 0.71
FAM3A-222ENST00000621967 TMEM88BA6NKF7 163 aa19.48■□□□□ 0.71
FAM3A-222ENST00000621967 PMS1P54277 932 aaKnown RBP19.48■□□□□ 0.71
FAM3A-222ENST00000621967 MTMR2Q13614 643 aa19.48■□□□□ 0.71
FAM3A-222ENST00000621967 CC2D1AQ6P1N0 951 aaPredicted RBP19.48■□□□□ 0.71
FAM3A-222ENST00000621967 ZHX1Q9UKY1 873 aaPredicted RBP19.48■□□□□ 0.71
FAM3A-222ENST00000621967 PHIPQ8WWQ0 1821 aa19.48■□□□□ 0.71
FAM3A-222ENST00000621967 KRT9P35527 623 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 ARHGAP25P42331 645 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 USP14P54578 494 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 UBXN1Q04323 297 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 STIM1Q13586 685 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 ZNF569Q5MCW4 686 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 TTI2Q6NXR4 508 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 SAPCD2Q86UD0 394 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 CREBRFQ8IUR6 639 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 MB21D1Q8N884 522 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 GMCL1P1Q8NEA9 526 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 EPC1Q9H2F5 836 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 AFG3L2Q9Y4W6 797 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 F5H6K3 240 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 PSMA7O14818 248 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 OR52Z1P0C646 297 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 GOLGA8HP0CJ92 632 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 BACE1P56817 501 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 KLRC3Q07444 240 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 PPIL2Q13356 520 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 ORC2Q13416 577 aaPredicted RBP19.47■□□□□ 0.71
FAM3A-222ENST00000621967 NONOQ15233 471 aaKnown RBP eCLIP19.47■□□□□ 0.71
FAM3A-222ENST00000621967 JAKMIP3Q5VZ66 844 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 SLFN13Q68D06 897 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 RASSF8Q8NHQ8 419 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 NOC3LQ8WTT2 800 aaKnown RBP19.47■□□□□ 0.71
FAM3A-222ENST00000621967 UBXN6Q9BZV1 441 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 KIAA1683Q9H0B3 1180 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 VCPKMTQ9H867 229 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 ST7Q9NRC1 585 aa19.47■□□□□ 0.71
FAM3A-222ENST00000621967 TBC1D8O95759 1140 aa19.46■□□□□ 0.71
FAM3A-222ENST00000621967 NAPAP54920 295 aa19.46■□□□□ 0.71
FAM3A-222ENST00000621967 CABP7Q86V35 215 aa19.46■□□□□ 0.71
FAM3A-222ENST00000621967 CEP112Q8N8E3 955 aa19.46■□□□□ 0.71
FAM3A-222ENST00000621967 DHTKD1Q96HY7 919 aaPredicted RBP19.46■□□□□ 0.71
FAM3A-222ENST00000621967 DNAJC7Q99615 494 aa19.46■□□□□ 0.71
FAM3A-222ENST00000621967 PARD6BQ9BYG5 372 aa19.46■□□□□ 0.71
FAM3A-222ENST00000621967 TLL2Q9Y6L7 1015 aa19.46■□□□□ 0.71
FAM3A-222ENST00000621967 ESYT2A0FGR8 921 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 CTAGE9A4FU28 777 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 IRF6O14896 467 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 SEC31AO94979 1220 aaKnown RBP19.45■□□□□ 0.7
FAM3A-222ENST00000621967 NDUFB10O96000 172 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 PLCG1P19174 1290 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 GNA11P29992 359 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 CHMP4BP1P59074 171 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 SPICE1Q8N0Z3 855 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 SLC35F6Q8N357 371 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 C6orf50Q9HD87 102 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 TTC26A0AVF1 554 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 C19orf81C9J6K1 198 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 PDHBP11177 359 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 SLC1A4P43007 532 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 CCDC96Q2M329 555 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 NEK8Q86SG6 692 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 RRP36Q96EU6 259 aaKnown RBP19.45■□□□□ 0.7
FAM3A-222ENST00000621967 TRIM47Q96LD4 638 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 DUSP9Q99956 384 aaKnown RBP19.45■□□□□ 0.7
FAM3A-222ENST00000621967 C7orf25Q9BPX7 421 aa19.45■□□□□ 0.7
FAM3A-222ENST00000621967 CCDC151A5D8V7 595 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 SMCO2A6NFE2 343 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 ZNF157P51786 506 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-222ENST00000621967 HMGCS2P54868 508 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 TUBB4BP68371 445 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 USP17L2Q6R6M4 530 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 ZNF771Q7L3S4 317 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-222ENST00000621967 OR8K1Q8NGG5 319 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 DCAF4Q8WV16 495 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 LPAR1Q92633 364 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 WNK4Q96J92 1243 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 NAPGQ99747 312 aaPredicted RBP19.44■□□□□ 0.7
FAM3A-222ENST00000621967 TRIM9Q9C026 710 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 CPVLQ9H3G5 476 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 TMOD4Q9NZQ9 345 aa19.44■□□□□ 0.7
FAM3A-222ENST00000621967 CAPN11Q9UMQ6 739 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms