RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 STK17AQ9UEE5 414 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 STXBP3O00186 592 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 FAM83BQ5T0W9 1011 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 WDR93Q6P2C0 686 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 GBP6Q6ZN66 633 aa13.79□□□□□ -0.2
MSH6-213ENST00000614496 RBM12Q9NTZ6 932 aaKnown RBP13.79□□□□□ -0.2
MSH6-213ENST00000614496 PBX1P40424 430 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 HS2ST1Q7LGA3 356 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 TADA2BQ86TJ2 420 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 CDCA7Q9BWT1 371 aaPredicted RBP13.78□□□□□ -0.2
MSH6-213ENST00000614496 NT5C3AQ9H0P0 336 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 GOLPH3Q9H4A6 298 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 GSTTP1A0A1W2PQM5 241 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 TARSL2A2RTX5 802 aaKnown RBP13.78□□□□□ -0.2
MSH6-213ENST00000614496 RCCD1A6NED2 376 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 PDE2AO00408 941 aaPredicted RBP13.78□□□□□ -0.2
MSH6-213ENST00000614496 EMBQ6PCB8 327 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 REXO2Q9Y3B8 237 aaKnown RBP13.78□□□□□ -0.2
MSH6-213ENST00000614496 TNFAIP3P21580 790 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 SH2D4AQ9H788 454 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 RIC8AQ9NPQ8 531 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 ZBTB21Q9ULJ3 1066 aa13.78□□□□□ -0.2
MSH6-213ENST00000614496 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
MSH6-213ENST00000614496 MRC1P22897 1456 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 SERPING1P05155 500 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 IRAK1P51617 712 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 SNAP25P60880 206 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 LRRC63Q05C16 580 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 MYCT1Q8N699 235 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 EHD4Q9H223 541 aa13.77□□□□□ -0.2
MSH6-213ENST00000614496 LRRC10BA6NIK2 292 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 ADAMTS3O15072 1205 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 H2AFZP0C0S5 128 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 NR1D1P20393 614 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 GUCY1A3Q02108 690 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
MSH6-213ENST00000614496 H2AFVQ71UI9 128 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 VIPAS39Q9H9C1 493 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 USP40Q9NVE5 1235 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 PCDHA1Q9Y5I3 950 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 NPHP3-ACAD11A0A0J9YXS1 232 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 CARSP49589 748 aaKnown RBP13.77□□□□□ -0.21
MSH6-213ENST00000614496 CYP2J2P51589 502 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 FUT2Q10981 343 aa13.77□□□□□ -0.21
MSH6-213ENST00000614496 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.21
MSH6-213ENST00000614496 CHD2O14647 1828 aaKnown RBP13.77□□□□□ -0.21
MSH6-213ENST00000614496 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 PLA2G4BP0C869 781 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 MYBL2P10244 700 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 WDR59Q6PJI9 974 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 USP17L6PQ6QN14 398 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 APTXQ7Z2E3 356 aaKnown RBP13.76□□□□□ -0.21
MSH6-213ENST00000614496 KBTBD4Q9NVX7 518 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 MAD2L2Q9UI95 211 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 SFI1A8K8P3 1242 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 BACH1O14867 736 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
MSH6-213ENST00000614496 VIMP08670 466 aaKnown RBP13.76□□□□□ -0.21
MSH6-213ENST00000614496 CETN1Q12798 172 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 COASYQ13057 564 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 PAPD7Q5XG87 772 aaKnown RBP13.76□□□□□ -0.21
MSH6-213ENST00000614496 ALS2CLQ60I27 953 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 RUFY4Q6ZNE9 571 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 TPH2Q8IWU9 490 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 ARHGAP20Q9P2F6 1191 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 POTECB2RU33 542 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 CALUO43852 315 aaPredicted RBP13.76□□□□□ -0.21
MSH6-213ENST00000614496 KCTD19Q17RG1 926 aaPredicted RBP13.76□□□□□ -0.21
MSH6-213ENST00000614496 PDXDC1Q6P996 788 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 FBXO33Q7Z6M2 555 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 IRF2BP1Q8IU81 584 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 GUF1Q8N442 669 aaKnown RBP13.76□□□□□ -0.21
MSH6-213ENST00000614496 RAD54LQ92698 747 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 ARL8AQ96BM9 186 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 FAM53CQ9NYF3 392 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 PLAAQ9Y263 795 aa13.76□□□□□ -0.21
MSH6-213ENST00000614496 GNA14O95837 355 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 CLEC4GQ6UXB4 293 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 DNAAF5Q86Y56 855 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.217e-14■■■□□ 18.5
MSH6-213ENST00000614496 C7orf25Q9BPX7 421 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 SEMA6BQ9H3T3 888 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 HDAC9Q9UKV0 1011 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 SLIT3O75094 1523 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms