RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 RBM28Q9NW13 759 aaKnown RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 EME2A4GXA9 379 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 TRIM37O94972 964 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 DRD4P21917 467 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 TBC1D1Q86TI0 1168 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 THEMISQ8N1K5 641 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 RNF217Q8TC41 542 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 LRRC45Q96CN5 670 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 KDM4CQ9H3R0 1056 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 GOLPH3Q9H4A6 298 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 KIF9Q9HAQ2 790 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 SLC39A2Q9NP94 309 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 GRID2IPA4D2P6 1211 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 KCNK3O14649 394 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 KIF3CO14782 793 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 GNAT2P19087 354 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 PLCG1P19174 1290 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 RCSD1Q6JBY9 416 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 ARMC9Q7Z3E5 817 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 ZNF483Q8TF39 744 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-212ENST00000604599 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.22
CDCA3-212ENST00000604599 AP1M1Q9BXS5 423 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 SEMA6BQ9H3T3 888 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 ORC4O43929 436 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 NMT2O60551 498 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 CTNND1O60716 968 aaKnown RBP13.67□□□□□ -0.22
CDCA3-212ENST00000604599 ARID5AQ03989 594 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 GRIK3Q13003 919 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 PDXDC1Q6P996 788 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 CEP120Q8N960 986 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 LMBR1Q8WVP7 490 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 TANGO6Q9C0B7 1094 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 ANP32DO95626 131 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 PAEPP09466 180 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
CDCA3-212ENST00000604599 MEI1Q5TIA1 1274 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 STAG2Q8N3U4 1231 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 KIAA0895Q8NCT3 520 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 CCDC47Q96A33 483 aaKnown RBP13.67□□□□□ -0.22
CDCA3-212ENST00000604599 CHMP6Q96FZ7 201 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 PLA2G12BQ9BX93 195 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 EBF2Q9HAK2 575 aa13.67□□□□□ -0.22
CDCA3-212ENST00000604599 PNPLA7Q6ZV29 1317 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 CCT8L1PA6NM43 557 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 MYBP10242 640 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 GHRP10912 638 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 PUM3Q15397 648 aaKnown RBP13.66□□□□□ -0.22
CDCA3-212ENST00000604599 BZW1Q7L1Q6 419 aaKnown RBP13.66□□□□□ -0.22
CDCA3-212ENST00000604599 CCDC197Q8NCU1 140 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 ARMC2Q8NEN0 867 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 DDX47Q9H0S4 455 aaKnown RBP13.66□□□□□ -0.22
CDCA3-212ENST00000604599 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDCA3-212ENST00000604599 C15orf41Q9Y2V0 281 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 CTSWP56202 376 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 MAN2A1Q16706 1144 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 ADGRA1Q86SQ6 560 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
CDCA3-212ENST00000604599 TAF4BQ92750 862 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 P3H4Q92791 437 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 IQCDQ96DY2 449 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDCA3-212ENST00000604599 LRP2BPQ9P2M1 347 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 MYH1P12882 1939 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 MYH4Q9Y623 1939 aa13.66□□□□□ -0.22
CDCA3-212ENST00000604599 BCORQ6W2J9 1755 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 DAPK3O43293 454 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 CEP104O60308 925 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 MYL1P05976 194 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 INHBEP58166 350 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 CUL1Q13616 776 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 NAB2Q15742 525 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 CHRNA2Q15822 529 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 BLIDQ8IZY5 108 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
CDCA3-212ENST00000604599 PSMD1Q99460 953 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 PNMA2Q9UL42 364 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 ENO4A6NNW6 628 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 INF2Q27J81 1249 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 SLC9C1Q4G0N8 1177 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 AGBL2Q5U5Z8 902 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 MICAL1Q8TDZ2 1067 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 AGAP11Q8TF27 550 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 TBC1D5Q92609 795 aa13.65□□□□□ -0.22
CDCA3-212ENST00000604599 BAZ2AQ9UIF9 1905 aaKnown RBP13.65□□□□□ -0.22
CDCA3-212ENST00000604599 CCDC194A0A1B0GVG4 234 aa13.64□□□□□ -0.23
CDCA3-212ENST00000604599 SSU72P8A0A1W2PR75 194 aa13.64□□□□□ -0.23
CDCA3-212ENST00000604599 SART1O43290 800 aaKnown RBP13.64□□□□□ -0.23
CDCA3-212ENST00000604599 TLR2O60603 784 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms