RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	RSPH14	Q9UHP6	348 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	DDX41	Q9UJV9	622 aa	Known RBP	10.89	□□□□□ -0.67
FARP1-222	ENST00000597777		F5H6K3	240 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	KLRC3	Q07444	240 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	SLC35G1	Q2M3R5	365 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	BTNL9	Q6UXG8	535 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	LEKR1	Q6ZMV7	388 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	PNMA8A	Q86V59	439 aa	Predicted RBP	10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	PLA2G4D	Q86XP0	818 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	SYCP3	Q8IZU3	236 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	C6orf50	Q9HD87	102 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	POLR3E	Q9NVU0	708 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	BARHL2	Q9NY43	387 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	PHIP	Q8WWQ0	1821 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	CTAGE15	A4D2H0	777 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	CTAGE9	A4FU28	777 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	POTEM	A6NI47	508 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	ZEB2	O60315	1214 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	CTAGE8	P0CG41	777 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	SLC1A4	P43007	532 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	GABPB1	Q06547	395 aa	Predicted RBP	10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	MKRN4P	Q13434	485 aa	Predicted RBP	10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	KRT79	Q5XKE5	535 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	CTAGE6	Q86UF2	777 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	CTAGE4	Q8IX94	777 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	BLID	Q8IZY5	108 aa		10.89	□□□□□ -0.67
FARP1-222	ENST00000597777	ETF1	P62495	437 aa	Known RBP	10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	EARS2	Q5JPH6	523 aa	Known RBP	10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	SULF1	Q8IWU6	871 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	GSPT2	Q8IYD1	628 aa	Known RBP	10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	SCYL3	Q8IZE3	742 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	NDUFB10	O96000	172 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	HOXA13	P31271	388 aa	Predicted RBP	10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	IQCB1	Q15051	598 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	NAA35	Q5VZE5	725 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	KANK3	Q6NY19	840 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	RRAGA	Q7L523	313 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	CABP7	Q86V35	215 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	TEX2	Q8IWB9	1127 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	VCPKMT	Q9H867	229 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	TRIM10	Q9UDY6	481 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	PCDHB13	Q9Y5F0	798 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	ESYT2	A0FGR8	921 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	WDR18	Q9BV38	432 aa		10.88	□□□□□ -0.67
FARP1-222	ENST00000597777	OTOF	Q9HC10	1997 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777		A0A1W2PRG0	241 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	STXBP3	O00186	592 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	SLFN14	P0C7P3	912 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	BMP3	P12645	472 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	BMS1	Q14692	1282 aa	Known RBP	10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	PRR16	Q569H4	304 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	DNAAF5	Q86Y56	855 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	SLC35F6	Q8N357	371 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	UHMK1	Q8TAS1	419 aa	Known RBP	10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	LPAR1	Q92633	364 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	WDR24	Q96S15	920 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	KIAA1683	Q9H0B3	1180 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	AS3MT	Q9HBK9	375 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	PNMA6F	A0A0J9YX94	578 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	KCNJ18	B7U540	433 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	ERLIN1	O75477	346 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	KCNJ12	Q14500	433 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	DPH6	Q7L8W6	267 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	C10orf67	Q8IYJ2	551 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	SHISA4	Q96DD7	197 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	HDAC6	Q9UBN7	1215 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L15	C9J2P7	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L13	C9JLJ4	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L11	C9JVI0	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L18	D6R9N7	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L22	D6RA61	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L17	D6RBQ6	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L19	D6RCP7	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L20	D6RJB6	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	CAPN2	P17655	700 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	GTF2A1	P52655	376 aa	Predicted RBP	10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	SET	Q01105	290 aa	Predicted RBP	10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L24	Q0WX57	530 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	MORC3	Q14149	939 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP17L6P	Q6QN14	398 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	ADGRF4	Q8IZF3	695 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	REXO1	Q8N1G1	1221 aa	Known RBP	10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	KIFC2	Q96AC6	838 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	KLRG1	Q96E93	195 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	MRFAP1L1	Q96HT8	127 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	JMJD4	Q9H9V9	463 aa		10.87	□□□□□ -0.67
FARP1-222	ENST00000597777	USP14	P54578	494 aa		10.86	□□□□□ -0.67
FARP1-222	ENST00000597777	TRAF1	Q13077	416 aa		10.86	□□□□□ -0.67
FARP1-222	ENST00000597777	NPY5R	Q15761	445 aa		10.86	□□□□□ -0.67
FARP1-222	ENST00000597777	MAATS1	Q7Z4T9	603 aa		10.86	□□□□□ -0.67
FARP1-222	ENST00000597777	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.86	□□□□□ -0.67
FARP1-222	ENST00000597777	PHLDB2	Q86SQ0	1253 aa		10.86	□□□□□ -0.67
FARP1-222	ENST00000597777	TNFRSF25	Q93038	417 aa		10.86	□□□□□ -0.67
FARP1-222	ENST00000597777	FAM212A	Q96EL1	285 aa		10.86	□□□□□ -0.67

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