RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 AK8Q96MA6 479 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 INPP4AQ96PE3 977 aaPredicted RBP17.11■□□□□ 0.33
IRF3-219ENST00000597636 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
IRF3-219ENST00000597636 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 ZPR1O75312 459 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 DNA2P51530 1060 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 FAM47AQ5JRC9 791 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 TMC4Q7Z404 712 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 EDEM3Q9BZQ6 932 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 ABCB11O95342 1321 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
IRF3-219ENST00000597636 RAD51CO43502 376 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 FTCDO95954 541 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 MYZAPP0CAP1 466 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 NF2P35240 595 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 OSBPL7Q9BZF2 842 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
IRF3-219ENST00000597636 SLC39A2Q9NP94 309 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 SLC12A6Q9UHW9 1150 aa17.11■□□□□ 0.33
IRF3-219ENST00000597636 MYBP10242 640 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 AMPD3Q01432 767 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 NAB2Q15742 525 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 SNCBQ16143 134 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 TDRD12Q587J7 1177 aaKnown RBP17.1■□□□□ 0.33
IRF3-219ENST00000597636 CYB5D1Q6P9G0 228 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 PARP9Q8IXQ6 854 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 EIF1ADQ8N9N8 165 aaKnown RBP17.1■□□□□ 0.33
IRF3-219ENST00000597636 BANK1Q8NDB2 785 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 DNM1LO00429 736 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 TRAPPC3O43617 180 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 TNNC1P63316 161 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 ATP2B2Q01814 1243 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 MEI1Q5TIA1 1274 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 INTS5Q6P9B9 1019 aaKnown RBP17.1■□□□□ 0.33
IRF3-219ENST00000597636 FUKQ8N0W3 1084 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
IRF3-219ENST00000597636 TMCO5BA8MYB1 307 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 H0YGN5 161 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 HSD17B3P37058 310 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 EVX2Q03828 476 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 CCDC50Q8IVM0 306 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 CCDC24Q8N4L8 307 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 NFS1Q9Y697 457 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 UTRNP46939 3433 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 DLEC1Q9Y238 1755 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 FGFR1OPO95684 399 aaKnown RBP17.09■□□□□ 0.33
IRF3-219ENST00000597636 RNASE9P60153 205 aaKnown RBP17.09■□□□□ 0.33
IRF3-219ENST00000597636 USP38Q8NB14 1042 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
IRF3-219ENST00000597636 SGSM3Q96HU1 749 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 LUC7LQ9NQ29 371 aaKnown RBP17.09■□□□□ 0.33
IRF3-219ENST00000597636 PCDHGC5Q9Y5F6 944 aa17.09■□□□□ 0.33
IRF3-219ENST00000597636 EHHADHQ08426 723 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 HLTFQ14527 1009 aaKnown RBP eCLIP17.08■□□□□ 0.33
IRF3-219ENST00000597636 SPRED3Q2MJR0 410 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 RCSD1Q6JBY9 416 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 ARHGAP27Q6ZUM4 889 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 ZNF34Q8IZ26 560 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 MAGEC3Q8TD91 643 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 VEZTQ9HBM0 779 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 TMEM59LQ9UK28 342 aa17.08■□□□□ 0.33
IRF3-219ENST00000597636 KLRC1P26715 233 aa17.08■□□□□ 0.32
IRF3-219ENST00000597636 ERVK-9P63128 1117 aa17.08■□□□□ 0.32
IRF3-219ENST00000597636 QPCTQ16769 361 aa17.08■□□□□ 0.32
IRF3-219ENST00000597636 ANKRD20A8PQ5CZ79 823 aa17.08■□□□□ 0.32
IRF3-219ENST00000597636 KLHL7Q8IXQ5 586 aa17.08■□□□□ 0.32
IRF3-219ENST00000597636 DAGLBQ8NCG7 672 aa17.08■□□□□ 0.32
IRF3-219ENST00000597636 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
IRF3-219ENST00000597636 TRPC5Q9UL62 973 aaPredicted RBP17.08■□□□□ 0.32
IRF3-219ENST00000597636 CLGNO14967 610 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 ECHS1P30084 290 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 BIRC3Q13489 604 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 UAP1Q16222 522 aaPredicted RBP17.07■□□□□ 0.32
IRF3-219ENST00000597636 GALNT17Q6IS24 598 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 FAM228AQ86W67 206 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 CEP57Q86XR8 500 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 PACSIN2Q9UNF0 486 aaPredicted RBP17.07■□□□□ 0.32
IRF3-219ENST00000597636 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 SERPING1P05155 500 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 OR52Z1P0C646 297 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 PDHBP11177 359 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 ZNF844Q08AG5 666 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 RUFY4Q6ZNE9 571 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 OR2W6PQ8NHA6 318 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 LRRC45Q96CN5 670 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 SEC16BQ96JE7 1060 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 NUCKS1Q9H1E3 243 aaKnown RBP17.07■□□□□ 0.32
IRF3-219ENST00000597636 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 BAZ2AQ9UIF9 1905 aaKnown RBP17.07■□□□□ 0.32
IRF3-219ENST00000597636 C5orf60A6NFR6 353 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 TLR2O60603 784 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
IRF3-219ENST00000597636 KCNMA1Q12791 1236 aa17.07■□□□□ 0.32
IRF3-219ENST00000597636 CUL1Q13616 776 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms