RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 GGPS1O95749 300 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 FDPSP14324 419 aaKnown RBP13.2□□□□□ -0.3
VMP1-211ENST00000591315 ANKRD1Q15327 319 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 NPY5RQ15761 445 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
VMP1-211ENST00000591315 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 NR2E3Q9Y5X4 410 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 UBIAD1Q9Y5Z9 338 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 LAMA2P24043 3122 aaKnown RBP13.2□□□□□ -0.3
VMP1-211ENST00000591315 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 TRIM43BA6NCK2 446 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 SPATA31C2B4DYI2 1134 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
VMP1-211ENST00000591315 CD2BP2O95400 341 aaKnown RBP13.19□□□□□ -0.3
VMP1-211ENST00000591315 DEXIO95424 95 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 MMP3P08254 477 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 CDK7P50613 346 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 FOSBP53539 338 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 PURAQ00577 322 aaKnown RBP13.19□□□□□ -0.3
VMP1-211ENST00000591315 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
VMP1-211ENST00000591315 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 DHX37Q8IY37 1157 aaKnown RBP13.19□□□□□ -0.3
VMP1-211ENST00000591315 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
VMP1-211ENST00000591315 TRIM43Q96BQ3 446 aaPredicted RBP13.19□□□□□ -0.3
VMP1-211ENST00000591315 BACH2Q9BYV9 841 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 C6orf50Q9HD87 102 aa13.19□□□□□ -0.3
VMP1-211ENST00000591315 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
VMP1-211ENST00000591315 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
VMP1-211ENST00000591315 ELP1O95163 1332 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 ARVCFO00192 962 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 ARP10275 920 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 ITGB8P26012 769 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 ICAM3P32942 547 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 CPT1AP50416 773 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 NLRP5P59047 1200 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 SP4Q02446 784 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 ITGA7Q13683 1181 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 HSDL1Q3SXM5 330 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
VMP1-211ENST00000591315 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 KAT2BQ92831 832 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 TBC1D32Q96NH3 1257 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 TRPV6Q9H1D0 765 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 PRDM5Q9NQX1 630 aaPredicted RBP13.18□□□□□ -0.3
VMP1-211ENST00000591315 PDLIM7Q9NR12 457 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 LIMCH1Q9UPQ0 1083 aa13.18□□□□□ -0.3
VMP1-211ENST00000591315 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
VMP1-211ENST00000591315 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
VMP1-211ENST00000591315 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
VMP1-211ENST00000591315 FIBPO43427 364 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 ZEB2O60315 1214 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 FOSP01100 380 aaPredicted RBP13.17□□□□□ -0.3
VMP1-211ENST00000591315 KCNA2P16389 499 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 SREBF1P36956 1147 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 MAGEA10P43363 369 aaPredicted RBP13.17□□□□□ -0.3
VMP1-211ENST00000591315 ARHGAP4P98171 946 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
VMP1-211ENST00000591315 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 LAMC2Q13753 1193 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 NBPF20Q3BBV1 942 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 C1orf53Q5VUE5 145 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 XRRA1Q6P2D8 792 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
VMP1-211ENST00000591315 SLC43A3Q8NBI5 491 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 SPATA33Q96N06 139 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 MTG1Q9BT17 334 aaPredicted RBP13.17□□□□□ -0.3
VMP1-211ENST00000591315 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
VMP1-211ENST00000591315 STK36Q9NRP7 1315 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 FAM86B1E9PN63 330 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 STAM2O75886 525 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 CDKL5O76039 1030 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 FAM86B2P0C5J1 330 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 GNPTABQ3T906 1256 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 KCNV1Q6PIU1 500 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 ANKRD33Q7Z3H0 272 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 NLRX1Q86UT6 975 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 FAM126BQ8IXS8 530 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 CCDC148Q8NFR7 591 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
VMP1-211ENST00000591315 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
VMP1-211ENST00000591315 GPRASP2Q96D09 838 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 MLXIPQ9HAP2 919 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 TRMT13Q9NUP7 481 aaKnown RBP13.16□□□□□ -0.3
VMP1-211ENST00000591315 POLR3EQ9NVU0 708 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 PCDHA4Q9UN74 947 aa13.16□□□□□ -0.3
VMP1-211ENST00000591315 LAMA3Q16787 3333 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms