RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ACCSQ96QU6 501 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 LRRC24Q50LG9 513 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 GLE1Q53GS7 698 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 EMBQ6PCB8 327 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 MMS22LQ6ZRQ5 1243 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 FAM186BQ8IYM0 893 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 SERPINI1Q99574 410 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 GPR108Q9NPR9 543 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 FGFR1OP2Q9NVK5 253 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 CLASP1Q7Z460 1538 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 ATP10DQ9P241 1426 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 MCF2LO15068 1137 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 SLCO1A2P46721 670 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 PAGE5Q96GU1 130 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 AS3MTQ9HBK9 375 aa15.75■□□□□ 0.11
CSNK1D-217ENST00000581241 BCAMP50895 628 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 MB21D1Q8N884 522 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 FMO2Q99518 471 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 MLXIPQ9HAP2 919 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 GSTA4O15217 222 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 DCTN3O75935 186 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 PSMD2Q13200 908 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 SEPT2Q15019 361 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 SARM1Q6SZW1 724 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 MORC4Q8TE76 937 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 ZNF496Q96IT1 587 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 TSC22D3Q99576 134 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 THRAP3Q9Y2W1 955 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 HIBCHQ6NVY1 386 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 CFAP36Q96G28 342 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 PLEKHF1Q96S99 279 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 ESYT2A0FGR8 921 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 TOM1L1O75674 476 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 ODR4Q5SWX8 454 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 TADA2BQ86TJ2 420 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 SRPRBQ9Y5M8 271 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 MFAP3LO75121 409 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 FOSP01100 380 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 POLGP54098 1239 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 ATG16L1Q676U5 607 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 DNAJC10Q8IXB1 793 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 TRIM15Q9C019 465 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 TBK1Q9UHD2 729 aa15.74■□□□□ 0.11
CSNK1D-217ENST00000581241 GFPT2O94808 682 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 APOA5Q6Q788 366 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 KDM5CP41229 1560 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 HSPA8P11142 646 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 ESRRAP11474 423 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 BTDP43251 543 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 KPNA2P52292 529 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 GRM1Q13255 1194 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 ZNF589Q86UQ0 364 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 UNC5CLQ8IV45 518 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 DEPDC1BQ8WUY9 529 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 CCDC138Q96M89 665 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 EXOC1LA0A1B0GW35 172 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 PCCAP05165 728 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 POLA2Q14181 598 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 LRRC41Q15345 812 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 SH2B2O14492 632 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 GYG1P46976 350 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 ART3Q13508 389 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 ASPRV1Q53RT3 343 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 AP1M1Q9BXS5 423 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 DISC1Q9NRI5 854 aa15.73■□□□□ 0.11
CSNK1D-217ENST00000581241 BICRAQ9NZM4 1560 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 A0A087WWV3 80 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 IQANK1A0A1B0GTG1 560 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 hCG_1984214I3L0E3 225 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 TADA3O75528 432 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 TOGARAM2Q6ZUX3 1019 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 ZNF713Q8N859 430 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 PIP4K2CQ8TBX8 421 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 ANKRD36BP1Q96IX9 119 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 ADPGKQ9BRR6 497 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 ACTN1P12814 892 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 E2F4Q16254 413 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 FAM160B1Q5W0V3 765 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 KRT80Q6KB66 452 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 FTOQ9C0B1 505 aaKnown RBP eCLIP15.72■□□□□ 0.113e-10■■■■■ 39.9
CSNK1D-217ENST00000581241 MRPL47Q9HD33 250 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 NFU1Q9UMS0 254 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 EEF1DP29692 281 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 DARS2Q6PI48 645 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 ANO3Q9BYT9 981 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 TLR7Q9NYK1 1049 aaKnown RBP15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 SORBS3O60504 671 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 CYP21A2P08686 494 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 ZNF449Q6P9G9 518 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 NRBF2Q96F24 287 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 TRAIPQ9BWF2 469 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 SPDYE16A6NNV3 312 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 H0YIN7 160 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 ALAS1P13196 640 aa15.72■□□□□ 0.11
CSNK1D-217ENST00000581241 SPDYE2Q495Y8 402 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms