RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ATAD5Q96QE3 1844 aa15.65■□□□□ 0.1
VPS33B-208ENST00000574755 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
VPS33B-208ENST00000574755 UTRNP46939 3433 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 SLC26A4O43511 780 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 CIITAP33076 1130 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 COASYQ13057 564 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 MTERF4Q7Z6M4 381 aaKnown RBP15.64■□□□□ 0.09
VPS33B-208ENST00000574755 CCDC84Q86UT8 332 aaPredicted RBP15.64■□□□□ 0.09
VPS33B-208ENST00000574755 FAM20AQ96MK3 541 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 NOC4LQ9BVI4 516 aaKnown RBP15.64■□□□□ 0.09
VPS33B-208ENST00000574755 PANK4Q9NVE7 773 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 ZNF215Q9UL58 517 aaPredicted RBP15.64■□□□□ 0.09
VPS33B-208ENST00000574755 POTEFA5A3E0 1075 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 HOXA7P31268 230 aaPredicted RBP15.64■□□□□ 0.09
VPS33B-208ENST00000574755 NCBP1Q09161 790 aaKnown RBP15.64■□□□□ 0.09
VPS33B-208ENST00000574755 RASA3Q14644 834 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 TNIP1Q15025 636 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 POTEGQ6S5H5 508 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 POTEEQ6S8J3 1075 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 FAM160B2Q86V87 743 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 TMTC1Q8IUR5 882 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 CYP2W1Q8TAV3 490 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 MAP7D2Q96T17 732 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 FEZ1Q99689 392 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 PGAP2Q9UHJ9 254 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 ADGRG1Q9Y653 693 aa15.64■□□□□ 0.09
VPS33B-208ENST00000574755 TTC26A0AVF1 554 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 MSH4O15457 936 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 SLU7O95391 586 aaKnown RBP15.63■□□□□ 0.09
VPS33B-208ENST00000574755 CYP3A4P08684 503 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 FECHP22830 423 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 LRRC63Q05C16 580 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 TBC1D8BQ0IIM8 1120 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 LRRC41Q15345 812 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 SYCP1Q15431 976 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 GPBP1Q86WP2 473 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 CATSPER3Q86XQ3 398 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 GLIS3Q8NEA6 775 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 L2HGDHQ9H9P8 463 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 GCOM1H8Y6P7 765 aaPredicted RBP15.63■□□□□ 0.09
VPS33B-208ENST00000574755 POLR2MP0CAP2 368 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 GNG11P61952 73 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 FAM26FQ5R3K3 315 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 CYP26C1Q6V0L0 522 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 CCDC65Q8IXS2 484 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 MYOCDQ8IZQ8 938 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 TBC1D5Q92609 795 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 PDCL3Q9H2J4 239 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 MRPL44Q9H9J2 332 aaKnown RBP15.63■□□□□ 0.09
VPS33B-208ENST00000574755 FBXO28Q9NVF7 368 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 FEM1BQ9UK73 627 aa15.63■□□□□ 0.09
VPS33B-208ENST00000574755 LUC7L2Q9Y383 392 aaKnown RBP15.63■□□□□ 0.09
VPS33B-208ENST00000574755 NFKBIEO00221 500 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 PLA2G6O60733 806 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 FGFR1OPO95684 399 aaKnown RBP15.62■□□□□ 0.09
VPS33B-208ENST00000574755 EGFRP00533 1210 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 KRT18P05783 430 aaKnown RBP15.62■□□□□ 0.09
VPS33B-208ENST00000574755 RPA1P27694 616 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 ERVK-24P63145 666 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 MAP3K10Q02779 954 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 RAD51AP2Q09MP3 1159 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 TNFAIP1Q13829 316 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 NAA30Q147X3 362 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-208ENST00000574755 TSG101Q99816 390 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 ZNF341Q9BYN7 854 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 LZTFL1Q9NQ48 299 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
VPS33B-208ENST00000574755 NPHP3-ACAD11A0A0J9YXS1 232 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 CYP11B2P19099 503 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 TRIM21P19474 475 aaKnown RBP15.62■□□□□ 0.09
VPS33B-208ENST00000574755 CACNB1Q02641 598 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-208ENST00000574755 MIIPQ5JXC2 388 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 TEX2Q8IWB9 1127 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 ANKRD7Q92527 254 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 ERO1AQ96HE7 468 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 PCMTD1Q96MG8 357 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-208ENST00000574755 MTFR1LQ9H019 292 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 TBC1D7Q9P0N9 293 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 STK24Q9Y6E0 443 aa15.62■□□□□ 0.09
VPS33B-208ENST00000574755 MEIS1O00470 390 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 FANCGO15287 622 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 SLC12A3P55017 1021 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 FKBP15Q5T1M5 1219 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 OR8K1Q8NGG5 319 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 CAPN11Q9UMQ6 739 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 DNM3Q9UQ16 869 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 IGLV3-22A0A075B6J6 115 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 NKRFO15226 690 aaKnown RBP eCLIP15.61■□□□□ 0.09
VPS33B-208ENST00000574755 URI1O94763 535 aaPredicted RBP15.61■□□□□ 0.09
VPS33B-208ENST00000574755 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 CASQ1P31415 396 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 TSR1Q2NL82 804 aaKnown RBP15.61■□□□□ 0.09
VPS33B-208ENST00000574755 HERC4Q5GLZ8 1057 aaPredicted RBP15.61■□□□□ 0.09
VPS33B-208ENST00000574755 WDR24Q96S15 920 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 NUP58Q9BVL2 599 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 ZHX3Q9H4I2 956 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 VAV3Q9UKW4 847 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 BCS1LQ9Y276 419 aa15.61■□□□□ 0.09
VPS33B-208ENST00000574755 ABCB11O95342 1321 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms